Job Description P0A959 Confidence 99.95% Date Thu Jan 5 11:09:27 GMT 2012 Rank 110 Aligned Residues 339 % Identity 11% Template d2ch1a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.4

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		A	P	F	G	F	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	S	K	G	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	I	Y	I	.	G	N	G	V	S	E	L	I	V	Q	A	M	Q	A	L	L	N	S	G	D	E	M
Query Conservation																																																											.
Alig confidence																																												.	.	.	.	.	.										.
Template Conservation																																												.	.	.	.	.	.
Template Sequence		G	P	G	P	S	N	C	S	K	R	V	L	T	A	M	T	N	T	V	L	S	N	F	H	A	E	L	F	R	T	M	D	E	V	K	D	G	L	R	Y	I	F	.	.	.	.	.	.	Q	T	E	N	R	A	T	M	C	V	S	G	S	A	H	A	G	M	E	A	M	L	S	N	L	L	E	E	G	D	R	V
Template Known Secondary structure		S	S	S	S											T	T	S					T	T																				.	.	.	.	.	.	T				S						S	S																T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																																			.
Query SS confidence											.	.																																			.
Query Sequence		L	V	P	A	P	D	Y	P	L	.	.	W	T	A	A	V	S	L	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K	I	.	T	P	R	T	R	G	I	V	I	I	N	P	N	N	P	T	G	A	V	Y	S	K	E	L	L	M	E	I	V	E	I	A	R	Q
Query Conservation											.	.																																			.
Alig confidence											.	.																						.	.												.																									.	.	.
Template Conservation																																		.	.																																					.	.	.
Template Sequence		L	I	A	V	N	G	I	W	A	E	R	A	V	E	M	S	E	R	Y	G	A	D	V	R	T	I	E	G	P	P	D	R	.	.	P	F	S	L	E	T	L	A	R	A	I	E	L	H	Q	P	K	C	L	F	L	T	H	G	D	S	S	S	G	L	L	Q	P	L	E	G	.	.	.	V	G	Q	I	C	H	Q
Template Known Secondary structure						S	S													T	T										T	T	S	.	.																	S						S			T	T	T	T						T	T	.	.	.
Template Predicted Secondary structure																																		.	.																																					.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.										.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.
Query Sequence		H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	.	.	.	.	.	.	.	.	.	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G	W	M	V	L	N	G	P	K	K	H	A	K	G	Y	I	E	G	L	E	M
Query Conservation																																			.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	D	C	L	L	I	V	D	A	V	A	S	L	C	G	V	P	F	Y	M	D	K	W	E	I	D	A	V	Y	T	G	A	Q	V	L	G	A	P	P	G	I	T	P	I	S	I	S	P	K	A	L	D	V	I	R	N	R	R	T	K	S	K	V	F	Y	W	D	L	L	L	L	G	N	Y	W	G	C	Y	D	E
Template Known Secondary structure		T	T								T	T	T	B	T	T	B				T	T	T	T	T															S	S																T		S	S			S		G	G	G									T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		L	A	S	M	R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L	I	N	D	I	P	G	V	S	C	V	K	P	R	G	A	L	.	.	.	.	Y	M	F	P	K	I	D	A	K	R	F	N	I	H
Query Conservation																																																																.	.	.	.
Alig confidence																							.	.																																								.	.	.	.											.	.	.	.
Template Conservation																							.	.																																																						.	.	.	.
Template Sequence		P	K	R	Y	H	H	T	V	A	S	N	L	I	F	A	L	R	E	A	L	A	.	.	Q	I	A	E	E	G	L	E	N	Q	I	K	R	R	I	E	C	A	Q	I	L	Y	E	G	L	G	K	M	G	L	D	I	F	V	K	D	P	R	H	R	L	P	T	V	T	G	I	M	I	P	K	G	V	.	.	.	.
Template Known Secondary structure																							.	.																													T			B	S	S		S	G	G	G	B		T	T								T	T		.	.	.	.
Template Predicted Secondary structure																							.	.																																																						.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380				.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		D	D	Q	K	M	V	L	D	F	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F	N	W	P	W	P	D	H	F	R	I	V	.	.	.	T	L	P	R	V	D	D	I	E	L	S	L	S	K	F	A	R	F	L	S	G
Query Conservation																																				.	.	.
Alig confidence																											.	.								.	.	.
Template Conservation																											.	.
Template Sequence		D	W	W	K	V	S	Q	Y	A	M	N	N	F	S	L	E	V	Q	G	G	L	G	P	T	F	.	.	G	K	A	W	R	V	G	I	M	G	E	C	S	T	V	Q	K	I	Q	F	Y	L	Y	G	F	K	E	S	L	K	A
Template Known Secondary structure																B			B				G	G	G	T	.	.	T	T								G	G	G		S
Template Predicted Secondary structure																											.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions