Job Description P0A959 Confidence 99.81% Date Thu Jan 5 11:09:27 GMT 2012 Rank 208 Aligned Residues 361 % Identity 11% Template d1wyub1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure															.	.	.	.																																							.	.	.
Query SS confidence															.	.	.	.																																							.	.	.
Query Sequence		P	V	L	K	E	A	K	R	L	E	E	E	G	.	.	.	.	N	K	V	L	K	L	N	I	G	N	P	A	P	F	G	F	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	.	.	.	S	K	G	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D
Query Conservation															.	.	.	.																																							.	.	.
Alig confidence															.	.	.	.												.	.	.	.	.																							.	.	.																						.
Template Conservation																														.	.	.	.	.																																															.
Template Sequence		T	L	V	R	H	Y	T	G	L	S	R	R	Q	V	G	V	D	T	T	F	Y	P	L	G	S	C	T	M	.	.	.	.	.	K	Y	N	P	K	L	H	E	E	A	A	R	L	F	A	D	L	H	P	Y	Q	D	P	R	T	A	Q	G	A	L	R	L	M	W	E	L	G	E	Y	L	K	A	L	T	G	M	.
Template Known Secondary structure												T	T				T	T	T	S				B	T	T	T			.	.	.	.	.													T	T	S	S			T	T	S		G	G	G																				T		.
Template Predicted Secondary structure																														.	.	.	.	.																																															.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.
Query Sequence		V	T	V	E	D	I	Y	I	G	N	G	V	S	E	L	I	V	Q	A	M	Q	A	L	L	.	.	.	.	.	.	.	.	N	S	G	D	E	M	L	V	P	A	P	D	Y	P	L	W	T	A	A	V	S	L	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K
Query Conservation																										.	.	.	.	.	.	.	.
Alig confidence		.																								.	.	.	.	.	.	.	.																																					.	.
Template Conservation		.																																																																				.	.
Template Sequence		.	D	A	I	T	L	E	P	A	A	G	A	H	G	E	L	T	G	I	L	I	I	R	A	Y	H	E	D	R	G	E	G	R	T	R	R	V	V	L	V	P	D	S	A	H	G	S	N	P	A	T	A	S	M	A	G	Y	Q	V	R	E	I	P	S	G	P	E	G	.	.	E	V	D	L	E	A	L	K	R	E
Template Known Secondary structure		.	S							S	S																			T	T		T	T	T								T	T	S		T									T	T								B		T	T	S	.	.	S	B
Template Predicted Secondary structure		.																																																																				.	.
Template SS confidence
			123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	P	R	T	R	G	I	V	I	I	N	P	N	N	P	T	G	A	V	Y	S	K	E	L	L	M	E	I	V	E	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V
Query Conservation
Alig confidence																								.	.	.																																.	.	.	.	.	.
Template Conservation																								.	.	.																																.	.	.	.	.	.
Template Sequence		L	G	P	H	V	A	A	L	M	L	T	N	P	N	T	L	G	L	F	E	R	R	.	.	.	I	L	E	I	S	R	L	C	K	E	A	G	V	Q	L	Y	Y	D	G	A	N	L	N	A	I	M	G	W	A	R	P	.	.	.	.	.	.	G	D	M	G	F	D	V	V	H	L	N	L	H	K	T	F	T	V
Template Known Secondary structure			S	T	T								S	S		T	T	S				T	T	.	.	.												T							G	G	G	G	G	G	T	T	T	T				.	.	.	.	.	.				T		S						T	T	T	T	T
Template Predicted Secondary structure																								.	.	.																																.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		245					.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.														.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	.	.	.	.	G	F	R	Q	G	W	M	V	L	N	G	P	K	K	H	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	I	E	G	L	E	M	L	A	S	M	R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y
Query Conservation			.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	H	G	G	G	G	P	G	S	G	P	V	G	V	K	A	H	L	A	P	Y	L	P	V	P	L	V	E	R	G	E	E	G	F	Y	L	D	F	D	R	P	K	S	I	G	R	V	R	S	F	Y	G	N	F	L	A	L	V	R	A	W	A	Y	I	R	T	L	G	L	E	G	L	K	K	A	A	A	L	A	V
Template Known Secondary structure				T	T	S											G	G	G	G	G	G			S							S	S									T	T					S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		E	Q	R	N	R	A	W	E	L	I	N	D	I	P	G	V	S	C	V	K	P	R	G	A	L	Y	M	F	P	K	I	D	A	K	R	F	N	I	H	D	D	Q	K	M	V	L	D	F	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F	N	W	P	W	P	D	H	F	R	I	V	T	L	.	.	P	R	V
Query Conservation																																																																													.	.
Alig confidence																																					.	.	.	.	.																	.																			.	.
Template Conservation																																					.	.	.	.	.																	.
Template Sequence		L	N	A	R	Y	L	K	E	L	L	K	E	K	G	Y	R	V	P	Y	D	G	P	S	M	H	E	F	V	A	Q	P	P	E	G	F	.	.	.	.	.	R	A	L	D	L	A	K	G	L	L	E	L	G	F	H	P	.	P	T	V	Y	F	P	L	I	V	K	E	A	L	M	V	E	P	T	E	T	E	A	K
Template Known Secondary structure														T	T		B		S	S		S	S			S					B		S	T	T		.	.	.	.	.												T	T				.				S		S	T	T	S	T	T								T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.																	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.						.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	I	E	L	S	L	S	K	F	A	R	F	L	S	G	Y	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	L	E	A	F	A	E	A	M	G	A	L	L	K	K	P	K	E
Template Known Secondary structure																T	S
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions