Job Description P0A959 Confidence 99.93% Date Thu Jan 5 11:09:27 GMT 2012 Rank 140 Aligned Residues 334 % Identity 12% Template d1w23a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.08

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.													.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		N	K	V	L	K	L	N	I	G	N	P	A	P	F	G	F	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	S	K	G	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	.	.	I
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence											.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.							.	.
Template Conservation											.	.	.	.	.																																																				.	.	.	.	.	.
Template Sequence		K	Q	V	F	N	F	N	A	G	.	.	.	.	.	P	S	A	L	P	K	P	A	L	E	R	A	Q	K	E	L	L	N	F	N	D	T	Q	M	S	V	M	E	L	S	H	R	S	Q	S	Y	E	E	V	H	E	Q	A	Q	N	L	L	R	E	L	L	.	.	.	.	.	.	Q	I	P	N	D	Y	Q	I	L
Template Known Secondary structure									S	S	.	.	.	.	.	S														T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																			.	.	.	.	.	.	T			T	T
Template Predicted Secondary structure											.	.	.	.	.																																																				.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10						.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		Y	I	G	N	G	V	S	E	L	I	V	Q	A	M	Q	A	L	L	N	S	G	D	E	M	L	V	P	A	P	D	Y	P	L	W	T	A	A	V	S	L	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K	.	I	T	P	R	T	R	G	I	V	I	I	N	P
Query Conservation																																																																				.
Alig confidence																																																																				.
Template Conservation
Template Sequence		F	L	Q	G	G	A	S	L	Q	F	T	M	L	P	M	N	L	L	T	K	G	T	I	G	N	Y	V	L	T	G	S	W	S	E	K	A	L	K	E	A	K	L	L	G	E	T	H	I	A	A	S	T	K	A	N	S	Y	Q	S	I	P	D	F	S	E	F	Q	L	N	E	N	D	A	Y	L	H	I	T	S	N
Template Known Secondary structure				S	S																T	T									S												T	T	S									G	G	G	T	S		S				G	G	G					T	T								S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	P	T	G	A	V	Y	S	K	E	L	L	M	E	I	V	E	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G	W	M	V	L	N	G	P
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.																								.	.
Template Conservation											.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		N	T	I	Y	G	T	Q	Y	Q	.	.	.	.	.	.	.	.	N	F	P	E	I	N	H	A	P	L	I	A	D	M	S	S	D	I	L	S	.	.	.	.	.	.	.	.	.	R	P	L	K	V	N	Q	F	G	M	I	Y	A	G	A	Q	K	N	L	G	P	S	G	.	.	V	T	V	V	I	V	K	K	D
Template Known Secondary structure			T	T	T	T				S	.	.	.	.	.	.	.	.	S						S	S							T	T	T	T	T	S	.	.	.	.	.	.	.	.	.	S				G	G	G		S						T	T	T	T	T	S		T	T	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.									160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.										180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.
		258	.	260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		K	K	H	A	K	G	Y	.	.	.	.	.	.	.	I	E	G	L	E	M	L	A	S	M	R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L	I	N	D	I	P	G	V	S	C	V	K	P	R	G
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	N	T	K	V	E	Q	V	P	T	M	L	Q	Y	A	T	H	I	K	S	D	S	L	Y	N	T	P	P	T	F	S	I	Y	M	L	R	N	V	L	D	W	I	K	D	L	G	G	A	E	A	I	A	K	Q	N	E	E	K	A	K	I	I	Y	D	T	I	D	E	S	N	G	F	Y	V	G	H	A	E	K
Template Known Secondary structure					S			T	T			G	G	G								T	T	T		S	S																				T	T																						T	T	T	T	S	S			S	S		G
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.			.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		A	L	Y	M	F	P	K	I	D	A	K	R	F	N	I	H	D	D	Q	K	M	V	L	D	F	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F	N	W	P	W	P	D	H	F	R	I	V	T	L	.	.	P	R	V	D	D	I	E	L	S	L	S	K	F	A	R	F	L	S	G
Query Conservation																																																						.	.
Alig confidence																	.																								.	.	.	.										.	.
Template Conservation																	.																								.	.	.	.
Template Sequence		G	S	R	S	L	M	N	V	T	F	N	L	R	N	E	.	E	L	N	Q	Q	F	L	A	K	A	K	E	Q	G	F	V	G	L	N	G	H	R	S	.	.	.	.	V	G	G	C	R	A	S	I	Y	N	A	V	P	I	D	A	C	I	A	L	R	E	L	M	I	Q	F	K	E	N
Template Known Secondary structure		G	G	B		S	S							S	S		.													T	T			S		B			T	T	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure																	.																								.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.					330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions