Job Description P0A959 Confidence 99.94% Date Thu Jan 5 11:09:27 GMT 2012 Rank 121 Aligned Residues 332 % Identity 13% Template d1qz9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.85

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.
Query SS confidence																																									.	.	.	.	.
Query Sequence		N	K	V	L	K	L	N	I	G	N	P	A	P	F	G	F	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	S	.	.	.	.	.	K	G	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	I	Y	I	G	N	G	V	S	E	L
Query Conservation																																									.	.	.	.	.
Alig confidence														.	.	.	.																								.	.	.	.	.																		.	.
Template Conservation														.	.	.	.																																														.	.
Template Sequence		E	G	V	I	Y	L	D	G	N	S	L	G	.	.	.	.	A	R	P	V	A	A	L	A	R	A	Q	A	V	I	A	E	E	W	G	N	G	L	I	R	S	W	N	S	A	G	W	R	D	L	S	E	R	L	G	N	R	L	A	T	L	.	.	I	G	A	R	D	G	E	V	V	V	T	D	T	T	S	I	N
Template Known Secondary structure		T	T						T	T	T	S		.	.	.	.			B	T	T											T						G	G	G					T	S	G	G	G											T	T	.	.	T	T			T	T	S					S
Template Predicted Secondary structure														.	.	.	.																																														.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		108	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence										.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		I	V	Q	A	M	Q	A	L	.	.	.	.	.	.	.	L	N	S	G	D	E	M	L	V	P	A	P	D	Y	P	L	W	T	A	A	V	S	L	.	.	.	.	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K	I	T	P	R	T	R	G	I	V	I	I	N
Query Conservation										.	.	.	.	.	.	.																								.	.	.	.
Alig confidence										.	.	.	.	.	.	.																								.	.	.	.												.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.
Template Sequence		L	F	K	V	L	S	A	A	L	R	V	Q	A	T	R	S	P	E	R	R	V	I	V	T	E	T	S	N	F	P	T	D	L	Y	I	A	E	G	L	A	D	M	L	Q	Q	G	Y	T	L	R	L	V	D	.	.	.	.	.	.	.	S	P	E	E	L	P	Q	A	I	D	Q	D	T	A	V	V	M	L	T	H
Template Known Secondary structure																	S	T	T								T	T	S																	S	S							S	.	.	.	.	.	.	.	S	G	G	G						S	T	T								S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.								.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	N	P	T	G	A	V	Y	S	K	E	L	L	M	E	I	V	E	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G	W	M	V	L	N	G
Query Conservation
Alig confidence															.	.	.																									.	.	.	.	.	.	.
Template Conservation															.	.	.																									.	.	.	.	.	.	.
Template Sequence		V	N	Y	K	T	G	Y	M	H	D	M	Q	A	.	.	.	L	T	A	L	S	H	E	C	G	A	L	A	I	W	D	L	A	H	S	A	G	A	V	P	.	.	.	.	.	.	.	V	D	L	H	Q	A	G	A	D	Y	A	I	G	C	T	Y	K	Y	L	N	G	G	P	G	S	Q	A	F	V	W	V	S	P
Template Known Secondary structure		B		T	T	T		B	B						.	.	.									T								T	T	T	T	T	T	S		.	.	.	.	.	.	.							T		S						S	S	S	T	T				T	T									T
Template Predicted Secondary structure															.	.	.																									.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		257	.	.	260	.	.	.	.	.	.																					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	K	K	H	A	K	G	Y	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	E	M	L	A	S	M	R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	C	D	L	V	P	Q	P	L	S	G	W	F	G	H	S	R	Q	F	A	M	E	P	R	Y	E	P	S	N	G	I	A	R	Y	L	C	G	T	Q	P	I	T	S	L	A	M	V	E	C	G	L	D	V	F	A	Q	T	D	M	A	S	L	R	R	K	S	L	A	L	T	D	L	F	I	E	L	V	E	Q
Template Known Secondary structure		T	T	T	T	T	S			S				G	G	G	B		T	T	S				S	S			B		S	S	G	G	G	G			S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330					.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.				.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.																																																						.	.	.
Query SS confidence																.	.	.	.																																																						.	.	.
Query Sequence		I	N	D	I	P	G	V	S	C	V	K	P	R	G	.	.	.	.	A	L	Y	M	F	P	K	I	D	A	K	R	F	N	I	H	D	D	Q	K	M	V	L	D	F	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F	N	W	P	W	P	D	H	F	R	I	V	T	L	P	.	.	.	R	V	D	D	I	E
Query Conservation																.	.	.	.																																																						.	.	.
Alig confidence																.	.	.	.										.	.	.	.	.	.	.	.																					.	.	.	.	.	.											.	.	.
Template Conservation																													.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Sequence		R	C	A	A	H	E	L	T	L	V	T	P	R	E	H	A	K	R	G	S	H	V	S	F	E	H	P	.	.	.	.	.	.	.	.	E	G	Y	A	V	I	Q	A	L	I	D	R	G	V	I	G	D	Y	R	E	.	.	.	.	.	.	P	R	I	M	R	F	G	F	T	P	L	Y	T	T	F	T	E	V	W
Template Known Secondary structure				T	T	S						S		S	S	G	G	G	B		S							T	.	.	.	.	.	.	.	.	T										T	T	T							T	.	.	.	.	.	.	T	T								T	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350									.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370							.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	L	S	K	F	A	R	F	L	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	V	Q	I	L	G	E	I	L	D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions