Job Description P0A959 Confidence 99.95% Date Thu Jan 5 11:09:27 GMT 2012 Rank 102 Aligned Residues 344 % Identity 15% Template d1jf9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.00

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.											.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	N	K	V	L	K	L	N	I	G	N	P	A	P	F	G	F	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	S	K	G	L	Y	.	.	.	.	.	.	.	.	.	.	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	I	Y	I
Query Conservation																																															.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.																												.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation																.	.	.	.																																																			.	.	.	.	.
Template Sequence		N	G	L	P	L	A	Y	L	D	S	A	A	S	A	.	.	.	.	Q	K	P	S	Q	V	I	D	A	E	A	E	F	Y	R	H	G	Y	A	A	V	H	R	G	I	H	T	L	S	A	Q	A	T	E	K	M	E	N	V	R	K	R	A	S	L	F	I	N	A	R	.	.	.	.	.	S	A	E	E	L	V	F
Template Known Secondary structure		T	T								T	T	T			.	.	.	.																	T					S	S		S	S																					T	T		S	.	.	.	.	.		G	G	G
Template Predicted Secondary structure																.	.	.	.																																																			.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																	.	.	.	.																.	.	.	.
Query SS confidence																	.	.	.	.																.	.	.	.
Query Sequence		G	N	G	V	S	E	L	I	V	Q	A	M	Q	A	L	.	.	.	.	L	N	S	G	D	E	M	L	V	P	A	P	D	Y	P	.	.	.	.	L	W	T	A	A	V	S	L	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K	I	T	P	R	T	R	G	I
Query Conservation																	.	.	.	.																.	.	.	.
Alig confidence																	.	.	.	.																.	.	.	.																							.	.
Template Conservation																																																														.	.
Template Sequence		V	R	G	T	T	E	G	I	N	L	V	A	N	S	W	G	N	S	N	V	R	A	G	D	N	I	I	I	S	Q	M	E	H	H	A	N	I	V	P	W	Q	M	L	C	A	R	V	G	A	E	L	R	V	I	P	L	N	P	D	G	.	.	T	L	Q	L	E	T	L	P	T	L	F	D	E	K	T	R	L	L
Template Known Secondary structure			S	S																			T	T							T	T			G	G	G	T											T								B		T	T	S	.	.		B		G	G	G							T	T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	I	N	P	N	N	P	T	G	A	V	Y	S	K	E	L	L	M	E	I	V	E	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G	W	M
Query Conservation
Alig confidence																			.	.	.																									.	.	.	.	.	.	.																								.	.
Template Conservation																			.	.	.																									.	.	.	.	.	.	.																								.	.
Template Sequence		A	I	T	H	V	S	N	V	L	G	T	E	N	P	L	A	E	.	.	.	M	I	T	L	A	H	Q	H	G	A	K	V	L	V	D	G	A	Q	A	V	M	H	H	P	.	.	.	.	.	.	.	V	D	V	Q	A	L	D	C	D	F	Y	V	F	S	G	H	K	L	Y	G	P	T	G	.	.	I	G	I	L
Template Known Secondary structure					S	B		T	T	T			B						.	.	.								T	T								T	T	T	T	T	T	S		.	.	.	.	.	.	.							T		S						G	G	G	T	T	S		S	S	.	.
Template Predicted Secondary structure																			.	.	.																									.	.	.	.	.	.	.																								.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.								210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.																	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	N	G	P	K	K	H	A	K	G	Y	I	E	G	L	E	M	L	A	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	V	K	E	A	L	L	Q	E	M	P	P	W	E	G	G	G	S	M	I	A	T	V	S	L	S	E	G	T	T	W	T	K	A	P	W	R	F	E	A	G	T	P	N	T	G	G	I	I	G	L	G	A	A	L	E	Y	V	S	A	L	G	L	N	N	I	A	E	Y	E	Q	N	L	M	H	Y	A	L	S	Q
Template Known Secondary structure									T	T				S	S		S	S	S	S						T	T	T							T	T	G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.							.	.	.	.	.	.	.	380	.	.			.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.											.	.
Query SS confidence																																																										.	.	.	.	.	.											.	.
Query Sequence		I	N	D	I	P	G	V	S	C	V	K	P	R	G	A	L	Y	M	F	P	K	I	D	A	K	R	F	N	I	H	D	D	Q	K	M	V	L	D	F	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F	N	W	P	.	.	.	.	.	.	W	P	D	H	F	R	I	V	T	L	.	.	P	R	V	D	D	I
Query Conservation																																																										.	.	.	.	.	.											.	.
Alig confidence																												.	.	.	.	.																										.	.	.	.	.	.											.	.
Template Conservation																												.	.	.	.	.
Template Sequence		L	E	S	V	P	D	L	T	L	Y	G	P	Q	N	R	L	G	V	I	A	F	N	L	G	K	H	.	.	.	.	.	H	A	Y	D	V	G	S	F	L	D	N	Y	G	I	A	V	R	T	G	H	H	C	A	M	P	L	M	A	Y	Y	N	V	P	A	M	C	R	A	S	L	A	M	Y	N	T	H	E	E	V
Template Known Secondary structure			T	T	S	T	T					S		T	T			S							T	T		.	.	.	.	.												T	T								T	T								T	T		S									T	T
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.						.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	S	L	S	K	F	A	R	F	L	S	G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	L	V	T	G	L	Q	R	I	H	R	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions