Return to main results Retrieve Phyre Job Id

Job DescriptionP0A959
Confidence100.00%DateThu Jan 5 11:09:27 GMT 2012
Rank26Aligned Residues382
% Identity29%Templated1gdea_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60..... ....70.........80....
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Query Sequence  KSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTA. QGYCDSKGLYSARKAIMQH
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Template Sequence  LSDRLELVSASEIRKLFDIAA. . . . GMKDVISLGIGEP. . . DFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEK
Template Known Secondary structure  S


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TT




S
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S


TT

S


TT

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   3......10.........20... ......30...... ...40.........50.........60.........70.....
 
   85....90...... ...100.........110.........120.........130.........140.........150.........160...
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Query Sequence  YQARGMRDVTVE. DIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRA
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Template Sequence  LKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKK
Template Known Secondary structure 




TTTSSSTTTTT

TT
S

TTT


GGGTT


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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   164.....170.........180.........190.........200.........210.........220..... ....230.........240..
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Query Sequence  KITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAP. LAPDLLTITFNGLSKTY
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Template Sequence  YVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTF
Template Known Secondary structure 

TTSS
TTT




TT

TTTT
B
TT




GGGSTT
GGGSTTTT
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   156...160.........170.........180.........190.........200.........210.........220.........230.....
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  RVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPG
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Template Sequence  AMTGWRLGFVAAPSWIIERMVKFQM. . . . . YNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNE. MG
Template Known Secondary structure  T
GGG



.....TTT
S

T
.TT
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   236...240.........250.........260 .........270.........280.........290.........300....... ..
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
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Query Sequence  VSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSLSKFARFLSGY
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Template Sequence  LPTVKPKGAFYIFPRIRDTGL. . . TSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKER
Template Known Secondary structure 






BTT

B
GGGT
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T

GGGG
GGGTTB

S
T
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   310.........320.........330 .........340.........350.........360.........370.........380......
 
   403
Predicted Secondary structure 
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Query Sequence  H
Query Conservation   
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Template Conservation 
Template Sequence  K
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   387
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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