Phyre 2 alignment of P0A959 with d1fg7a

Job Description P0A959
Confidence 100.00% Date Thu Jan 5 11:09:27 GMT 2012

Rank 76 Aligned Residues 325

% Identity 18% Template d1fg7a_

SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like

Resolution 1.50

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence	E	G	N	K	V	L	K	L	N	I	G	N	P	A	P	F	G	F	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	S	K	G	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	I	Y	I	G	N	G	V	S	E	L	I	V	Q
Query Conservation
Alig confidence														.	.	.											.	.	.	.	.	.										.														.	.	.	.	.	.
Template Conservation														.	.	.											.	.	.	.	.	.										.														.	.	.	.	.	.
Template Sequence	G	G	N	G	D	V	W	L	N	A	N	E	Y	.	.	.	P	T	A	V	E	F	Q	L	T	Q	.	.	.	.	.	.	Q	T	L	N	R	Y	P	E	C	.	Q	P	K	A	V	I	E	N	Y	A	Q	Y	A	.	.	.	.	.	.	G	V	K	P	E	Q	V	L	V	S	R	G	A	D	E	G	I	E	L
Template Known Secondary structure	T	T	T		S				S	S				.	.	.	S	S									.	.	.	.	.	.			T	T	S				S	.	S													.	.	.	.	.	.	T	S		G	G	G					S
Template Predicted Secondary structure														.	.	.											.	.	.	.	.	.										.														.	.	.	.	.	.
Template SS confidence
	27	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

	111	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence	A	M	Q	A	L	L	N	S	G	.	D	E	M	L	V	P	A	P	D	Y	P	L	W	T	A	A	V	S	L	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K	I	T	P	R	T	R	G	I	V	I	I	N	P	N	N	P	T	G	A	V	Y	S	K	E	L
Query Conservation										.
Alig confidence										.																																		.	.	.
Template Conservation																																												.	.	.
Template Sequence	L	I	R	A	F	C	E	P	G	K	D	A	I	L	Y	C	P	P	T	Y	G	X	Y	S	V	S	A	E	T	I	G	V	E	C	R	T	V	P	T	L	D	N	W	.	.	.	Q	L	D	L	Q	G	I	S	D	K	L	D	G	V	K	V	V	Y	V	C	S	P	N	N	P	T	G	Q	L	I	N	P	Q	D
Template Known Secondary structure								T	T	T							S	S	S		T										T										T	T	S	.	.	.									T	S		T	T								S	S		T	T	T
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
	91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	M	E	I	V	E	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G	W	M	V	L	N	G	P	K	K	H	A	K	G	Y	I	E	G	L	E
Query Conservation
Alig confidence																	.															.	.	.																																											.	.	.	.
Template Conservation																	.															.	.	.																																											.	.	.	.
Template Sequence	F	R	T	L	L	E	L	T	R	G	K	A	I	V	V	A	.	D	E	A	Y	I	E	F	C	P	Q	A	S	L	A	.	.	.	G	W	L	A	E	Y	P	H	L	A	I	L	R	T	L	S	K	A	F	A	L	A	G	L	R	C	G	F	T	L	A	N	E	E	V	I	N	L	L	X	K	V	.	.	.	.
Template Known Secondary structure									T	T	T						.			T	T	G	G	G	S	G	G	G		S	G	.	.	.	G	G	T	T	T		T	T							S	S	S	T	T			G	G	G																			.	.	.	.
Template Predicted Secondary structure																	.															.	.	.																																											.	.	.	.
Template SS confidence
	168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	M	L	A	S	M	R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L	I	N	D	I	P	G	V	S	C	V	K	P	R	G	A	L	Y	M	F	P	K	I	D	A	K	R	F	N	I	H	D	D	Q
Query Conservation
Alig confidence	.	.	.																					.																																															.	.	.	.	.	.	.	.
Template Conservation	.	.	.																					.																																															.	.	.	.	.	.	.	.
Template Sequence	.	.	.	I	A	P	Y	P	L	S	T	P	V	A	D	I	A	A	Q	A	L	S	P	.	Q	G	I	V	A	X	R	E	R	V	A	Q	I	I	A	E	R	E	Y	L	I	A	A	L	K	E	I	P	C	V	E	Q	V	F	D	S	E	T	N	Y	I	L	A	R	F	K	.	.	.	.	.	.	.	.	A	S
Template Known Secondary structure	.	.	.	S		S	S		S												T	S		.																											S	T	T								S	S	S							T	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure	.	.	.																					.																																															.	.	.	.	.	.	.	.
Template SS confidence
				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.									.	.

	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	M	V	L	D	F	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F	N	W	P	W	P	D	H	F	R	I	V	T	L	P	R	V	D	D	I	E	L	S	L	S	K	F	A
Query Conservation
Alig confidence																					.													.
Template Conservation																					.													.
Template Sequence	S	A	V	F	K	S	L	W	D	Q	G	I	I	L	R	D	Q	N	K	Q	.	P	S	L	S	G	C	L	R	I	T	V	G	.	T	R	E	E	S	Q	R	V	I	D	A	L	R
Template Known Secondary structure										T	T							T	T	S	.	T	T		T	T								.
Template Predicted Secondary structure																					.													.
Template SS confidence
	308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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