Phyre 2 alignment of P0A959 with d1eg5a

Job Description P0A959
Confidence 99.94% Date Thu Jan 5 11:09:27 GMT 2012

Rank 119 Aligned Residues 333

% Identity 11% Template d1eg5a_

SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like

Resolution 2.00

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.										.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																																														.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.																																														.	.	.
Query Sequence	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	S	.	.	.	.	.	.	.	.	.	K	G	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	I	Y	I	G	N	G	V	S	E	L	I	V	Q	A	M	Q	A	L	L	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.																																														.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.															.	.	.	.	.	.																										.	.	.
Template Conservation																																															.	.	.	.	.	.
Template Sequence	R	V	D	D	R	V	L	E	E	X	I	V	F	Y	R	E	K	Y	G	N	P	N	S	A	H	G	X	G	I	E	A	N	L	H	X	E	K	A	R	E	K	V	A	K	V	L	.	.	.	.	.	.	G	V	S	P	S	E	I	F	F	T	S	C	A	T	E	S	I	N	W	I	L	K	T	V	A	E	T	F
Template Known Secondary structure																T					T	T		S	S																						.	.	.	.	.	.	T	S		G	G	G					S																	T
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
	12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.

		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure	.
Query SS confidence	.
Query Sequence	.	N	S	G	D	E	M	L	V	P	A	P	D	Y	P	L	W	T	A	A	V	S	L	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K	I	T	P	R	T	R	G	I	V	I	I	N	P	N	N	P	T	G	A	V	Y	S	K	E	L	L	M	E	I	V	E
Query Conservation	.
Alig confidence	.
Template Conservation
Template Sequence	E	K	R	K	R	T	I	I	T	T	P	I	E	H	K	A	V	L	E	T	X	K	Y	L	S	X	K	G	F	K	V	K	Y	V	P	V	D	S	R	G	V	V	K	L	E	E	L	E	K	L	V	D	E	D	T	F	L	V	S	I	X	A	A	N	N	E	V	G	T	I	Q	P	V	E	D	V	T	R	I	V
Template Known Secondary structure	T	T	T								T	T	S														T	T								B		T	T	S		B											T	T								S	B		T	T	T		B	B
Template Predicted Secondary structure
Template SS confidence
	86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

	196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G	W	M	V	L	N	G	P	K	K	H	A	K	G	Y	I	E	G	L	E	M	L	A	S	M	R
Query Conservation
Alig confidence																						.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence	K	K	K	N	K	E	T	L	V	H	V	D	A	V	Q	T	I	G	K	I	P	.	.	.	.	.	.	.	F	S	L	E	K	L	E	V	D	Y	A	S	F	S	A	H	K	F	H	G	P	K	G	V	G	I	T	Y	I	R	K	G	V	P	I	R	P	L	I	H	G	G	G	Q	E	R	G	L	R	S	G	T
Template Known Secondary structure					T	T								T	T	T	T	T	T	S		.	.	.	.	.	.	.				T	T	T			S						G	G	G	G	T	S		T	T								T	T	S					S	B		S	S		T	T	T	T	T	B		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
	166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.								.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

	276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L	I	N	D	I	P	G	V	S	C	V	K	P	R	G	A	L	Y	M	F	P	K	I	D	A	K	R	F	N	I	H	D	D	Q	K	M	V	L	D	F
Query Conservation
Alig confidence															.	.	.	.																																																		.	.	.	.
Template Conservation															.	.	.	.																																																		.	.	.	.
Template Sequence	Q	N	V	P	G	I	V	G	A	A	R	A	X	E	.	.	.	.	I	A	V	E	E	L	S	E	A	A	K	H	X	E	K	L	R	S	K	L	V	S	G	L	X	N	L	G	A	H	I	I	T	P	L	E	I	S	L	P	N	T	L	S	V	S	F	P	N	.	.	.	.	I	R	G	S	T	L	Q	N	L
Template Known Secondary structure															.	.	.	.					T																					T	T	T					S		T	T	S	B		T	T							T	T	.	.	.	.
Template Predicted Secondary structure															.	.	.	.																																																		.	.	.	.
Template SS confidence
	239	240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.					.	.	.	.	.	.	.	.	310

	356	.	.	.	360	.	.	.	.	.	.	.	.	.						370	.	.	.	.	.	.	.	.	.	380	.	.			.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure															.	.	.	.	.														.	.
Query SS confidence															.	.	.	.	.														.	.
Query Sequence	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F	.	.	.	.	.	N	W	P	W	P	D	H	F	R	I	V	T	L	.	.	P	R	V	D	D	I	E	L	S	L	S	K	F	A	R	F	L	S	G	Y
Query Conservation															.	.	.	.	.														.	.
Alig confidence															.	.	.	.	.														.	.
Template Conservation
Template Sequence	L	S	G	Y	G	I	Y	V	S	T	H	V	L	D	A	X	G	V	D	R	R	I	A	Q	G	A	I	R	I	S	L	C	K	Y	N	T	E	E	E	V	D	Y	F	L	K	K	I	E	E	I	L	S	F	L
Template Known Secondary structure				T	T				B							T	T																T	T
Template Predicted Secondary structure
Template SS confidence
	311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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