Job Description P0A959 Confidence 99.92% Date Thu Jan 5 11:09:27 GMT 2012 Rank 149 Aligned Residues 320 % Identity 10% Template c3qm2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium Resolution 2.25 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		K	V	L	K	L	N	I	G	N	P	A	P	F	G	F	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	S	K	G	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	.	.	I	Y	I	G	N	G	V	S	E	L	I	V	Q	A
Query Conservation																																																																		.	.
Alig confidence												.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.							.	.
Template Conservation												.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Sequence		Q	V	F	N	F	S	S	G	P	A	.	.	.	.	.	M	L	P	A	E	V	L	K	L	A	Q	Q	E	V	.	.	.	.	.	.	.	.	.	.	.	A	E	E	A	E	Q	D	F	R	D	L	L	.	.	.	.	.	.	N	I	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	G	V
Template Known Secondary structure								S	S	S		.	.	.	.	.											T				.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	T			T	T								S		T	T
Template Predicted Secondary structure												.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.												.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		M	Q	A	L	L	N	S	G	D	E	M	L	V	P	A	P	D	Y	P	L	.	.	W	T	A	A	V	S	L	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K	I	T	P	R	T	R	G	I	V	I	I	N	P	N	N	P	T	G	A	V	Y	S	K	E	L
Query Conservation																						.	.
Alig confidence																						.	.																																																								.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		P	L	N	L	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	A	P	Q	I	I	D	A	K	I	T	V	D	G	K	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	L	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	.	.	.
Template Known Secondary structure							T	T									S	S											T	T	T	S												T	T							G	G	G					T	T		S						S			T	T	T	T					.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	E	I	V	E	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G	W	M	V	L	N	G	P	K	K	H	A	K	G	Y	I	E	G	L	E
Query Conservation
Alig confidence		.	.							.	.																.	.	.	.	.	.	.	.	.																								.	.
Template Conservation		.	.							.	.																.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		.	.	E	T	P	D	F	G	.	.	P	E	V	V	V	T	A	D	F	S	S	T	I	L	S	.	.	.	.	.	.	.	.	.	A	P	L	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	.	.	L	T	L	V	I	V	R	E	D	L	L	G	K	A	H	E	S	C	P	S	I
Template Known Secondary structure		.	.							.	.	T	T								T	T	T	T	T	S	.	.	.	.	.	.	.	.	.	S				G	G	G		S						T	T	T	T	T			T	T	.	.								G	G	G		S				T	T	S		G	G
Template Predicted Secondary structure		.	.							.	.																.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
				161	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.										.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		M	L	A	S	M	R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L	I	N	D	I	P	G	V	S	C	V	K	P	R	.	.	.	G	A	L	Y	M	F	P	K	I	D	A	K	R	F	N	I	H
Query Conservation																																																														.	.	.
Alig confidence																																																														.	.	.														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		L	D	Y	T	V	L	N	D	N	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	Q	G	G	V	A	A	M	H	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	Q	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	N	T	.	.	.	.
Template Known Secondary structure		G											S																T																						T		S	S					B		G	G	G	B		S	S							S	S	G	G	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.			.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		D	D	Q	K	M	V	L	D	F	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F	N	W	P	W	P	D	H	F	R	I	V	T	L	.	.	P	R	V	D	D	I	E	L	S	L	S	K	F	A	R	F	L	S	G	Y
Query Conservation																																						.	.
Alig confidence		.																							.	.	.	.										.	.
Template Conservation		.																							.	.	.	.
Template Sequence		.	L	D	K	V	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	.	.	.	.	V	G	G	M	R	A	S	I	Y	N	A	M	P	I	E	G	V	K	A	L	T	D	F	M	I	D	F	E	R	R	H
Template Known Secondary structure		.	G											T	T					B			T	T	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure		.																							.	.	.	.
Template SS confidence
			309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330					.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions