Job Description P0A959 Confidence 100.00% Date Thu Jan 5 11:09:27 GMT 2012 Rank 66 Aligned Residues 383 % Identity 11% Template c3mebB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: structure of cytoplasmic aspartate aminotransferase from giardia2 lamblia Resolution 1.90 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																										.																			.	.															.	.	.	.
Query SS confidence																										.																			.	.															.	.	.	.
Query Sequence		L	E	N	V	C	Y	D	I	R	G	P	V	L	K	E	A	K	R	L	E	E	E	G	N	.	K	V	L	K	L	N	I	G	N	P	A	P	F	G	F	D	A	P	.	.	D	E	I	L	V	D	V	I	R	N	L	P	T	A	.	.	.	.	Q	G	Y	C	D	S	K	G	L	Y	S	A	R	K	A	I	M
Query Conservation																										.																			.	.															.	.	.	.
Alig confidence																										.																			.	.															.	.	.	.
Template Conservation
Template Sequence		F	S	G	F	P	A	S	P	P	D	A	I	L	N	L	T	V	L	Y	N	A	D	T	N	P	K	K	V	N	L	G	V	G	A	Y	R	D	E	S	G	K	P	W	I	L	P	A	V	K	E	A	E	A	I	I	S	S	D	L	S	K	Y	N	K	E	Y	P	P	V	A	G	F	P	L	F	L	E	A	A	Q
Template Known Secondary structure		T	T	T								T	T													T	T					S	S						T	T	S																	S		T	T	T	S			S				T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.		.	.	150	.	.	.
Predicted Secondary structure																		.	.																		.	.																								.	.	.	.										.
Query SS confidence																		.	.																		.	.																								.	.	.	.										.
Query Sequence		Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	I	.	.	Y	I	G	N	G	V	S	E	L	I	V	Q	A	M	Q	A	L	.	.	L	N	S	G	D	E	M	L	V	P	A	P	D	Y	P	L	W	T	A	A	V	S	L	.	.	.	.	S	S	G	K	A	V	H	Y	L	.	C	D	E	S	S	D
Query Conservation																		.	.																		.	.																								.	.	.	.										.
Alig confidence																		.	.																		.	.																								.	.	.	.										.
Template Conservation
Template Sequence		F	L	M	F	G	K	D	S	K	A	A	Q	E	G	R	I	A	S	C	Q	S	L	S	G	T	G	S	L	H	I	G	F	E	F	L	H	L	W	M	P	K	A	E	F	Y	M	P	S	T	T	W	P	N	H	Y	G	I	Y	D	K	V	F	N	K	L	K	V	P	Y	K	E	Y	T	Y	L	R	K	D	G	E
Template Known Secondary structure							T	T						T	T								S																		T	T							S	S			T												T	T	T	S								B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																																					.	.	.
Query SS confidence														.	.	.																																																					.	.	.
Query Sequence		W	F	P	D	L	D	D	I	R	A	K	I	.	.	.	T	P	R	T	R	G	I	V	I	I	N	P	N	N	P	T	G	A	V	Y	S	K	E	L	L	M	E	I	V	E	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	.	.	.	A	E	H	H	S	I	A	P	L	A
Query Conservation														.	.	.																																																					.	.	.
Alig confidence														.	.	.																																																					.	.	.
Template Conservation
Template Sequence		L	E	I	D	F	S	N	T	K	K	D	I	Q	S	A	P	E	K	S	I	F	L	F	H	A	C	A	H	N	P	S	G	I	D	F	T	E	A	Q	W	K	E	L	L	P	I	M	K	E	K	K	H	I	A	F	F	D	S	A	Y	Q	G	F	A	T	G	S	F	E	A	D	A	F	A	V	R	M	F	V	D
Template Known Secondary structure		S	S	B												S		T	T							S	S	S		T	T	T																				T								S		T	T	T	S	S	S						T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.											.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G	W	M	V	L	N	G	P	K	K	H	A	K	G	Y	I	E	G	L	E	M	L	A	S	.	.	.	.	.	.	.	.	.	.	M	R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		A	G	V	E	V	L	V	A	Q	S	F	S	K	N	F	G	L	Y	G	E	R	I	G	C	L	H	V	V	H	A	G	V	E	G	S	V	E	K	N	K	A	L	S	A	A	M	V	S	G	M	T	L	Q	I	R	K	T	W	S	M	S	A	I	H	G	A	Y	I	V	Q	V	I	V	H	D	K	R	L	L	Q
Template Known Secondary structure			T										T	T	T	S			G	G	G											S		S	S	S																					T	T	T	S	S														T	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
				296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L	I	N	D	I	P	G	V	S	C	V	K	P	R	G	A	L	Y	M	F	P	K	I	D	A	K	R	F	N	I	H	D	D	Q	K	M	V	L	D	F	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F	N	W	P	W
Query Conservation		.	.
Alig confidence		.	.																										.																																																.	.	.	.	.
Template Conservation																													.																																																.	.	.	.	.
Template Sequence		M	F	Y	D	N	V	K	E	M	S	A	R	I	H	R	M	R	S	L	L	H	A	S	L	A	K	R	.	K	T	P	G	P	G	S	K	G	T	W	D	H	I	L	T	A	I	G	M	F	T	F	T	G	L	T	P	E	H	V	D	Y	L	K	E	K	W	S	I	Y	L	V	K	A	G	G	.	.	.	.	.
Template Known Secondary structure																												T	.	T				S	T	T	T	T			T							S	S																							B	T	G	G	G	.	.	.	.	.
Template Predicted Secondary structure																													.																																																.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		374	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		P	D	H	F	R	I	V	T	L	.	P	R	V	D	D	I	E	L	S	L	S	K	F	A	R	F	L	S	G	Y
Query Conservation											.
Alig confidence		.	.	.	.						.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	R	M	S	M	C	G	L	T	E	S	N	C	D	Y	V	A	E	A	I	H	D	A	V	T	K	L
Template Known Secondary structure		.	.	.	.				G	G	G			T	T	T															S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low