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Job DescriptionP0A959
Confidence99.82%DateThu Jan 5 11:09:27 GMT 2012
Rank207Aligned Residues320
% Identity11%Templatec3hl2D_
PDB info PDB header:transferaseChain: D: PDB Molecule:o-phosphoseryl-trna(sec) selenium transferase; PDBTitle: the crystal structure of the human sepsecs-trnasec complex
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120. ........130.........140......... 150.
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Query Sequence  SARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGDE. . . MLVPAPDYPLWTAAVSLSSGKAVHYLCD. ES
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Template Sequence  KITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEG
Template Known Secondary structure  T
TT

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TT





TT


T
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   116...120.........130.........140.........150.........160.........170.........180.........190.....
 
   152.......160..... ....170.........180.........190.........200.........210.........220.......
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Query Sequence  SDWFPDLDDIRAKI. . . . TPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLA
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Template Sequence  DELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEE. . . LAVICANYDIPHIVNNAYGVQSSKCMH. LIQQGAR
Template Known Secondary structure  T


GGGSS

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   196...200.........210.........220.........230....... ..240.........250.........260.... .....270.
 
   228.230.........240.........250.........260.........270.........280.........290.........300.......
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Query Sequence  PDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLY
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Template Sequence  VGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYP. . . . . GRASASPSLDVLITLLSLGSNGYKKLLKERKEMFS
Template Known Secondary structure  S


S


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   272.......280.........290.........300.........310. ........320.........330.........340......
 
   308.310.........320.........330.........340.........350.........360. ........
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Query Sequence  EQRNRAWELINDIPGVSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEKV. . . . . . . . . . . . . . . . . . LLVQGTAF
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Template Sequence  YLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHT
Template Known Secondary structure  TT

B


TT
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TT

TTTS

TT

S

SS
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   347..350.........360.........370.........380.........390.........400.........410.........420......
 
   370.........380.. .......390.........400....
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Query Sequence  NWPWPDHFRIVTL. . PRVDDIELSLSKFARFLSGYHQ
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Template Sequence  NNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRK
Template Known Secondary structure  S

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   427..430.........440.........450.........460...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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