Job Description P0A959 Confidence 99.90% Date Thu Jan 5 11:09:27 GMT 2012 Rank 170 Aligned Residues 323 % Identity 11% Template c3frkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:qdtb; PDBTitle: x-ray structure of qdtb from t. thermosaccharolyticum in2 complex with a plp:tdp-3-aminoquinovose aldimine Resolution 2.15 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	S	K	G	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	I	Y	I	G	N	G	V	S	E	L	I	V	Q	A	M	Q	A	L	.	L	N	S	G	D	E	M	L	V	P	A	P	D	Y	P
Query Conservation																																																																		.
Alig confidence																							.													.	.	.	.	.	.	.	.																							.
Template Conservation																							.													.	.	.	.	.	.	.	.
Template Sequence		Y	E	I	K	F	K	F	E	E	I	Y	K	R	N	W	F	I	L	G	D	E	.	D	K	K	F	E	Q	E	F	A	D	Y	C	.	.	.	.	.	.	.	.	N	V	N	Y	C	I	G	C	G	N	G	L	D	A	L	H	L	I	L	K	G	Y	D	I	G	F	G	D	E	V	I	V	P	S	N	T	F	I
Template Known Secondary structure															T			S	S				.												T	.	.	.	.	.	.	.	.	T	S	S						S													T	T			T	T							T	T	S
Template Predicted Secondary structure																							.													.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	T	A	A	V	S	L	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K	I	T	P	R	T	R	G	I	V	I	I	N	P	N	N	P	T	G	A	V	Y	S	K	E	L	L	M	E	I	V	E	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y
Query Conservation
Alig confidence																											.	.	.	.																															.	.	.
Template Conservation																											.	.	.	.																															.	.	.
Template Sequence		A	T	A	L	A	V	S	Y	T	G	A	K	P	I	F	V	E	P	D	I	R	T	Y	N	I	.	.	.	.	D	P	S	L	I	E	S	A	I	T	E	K	T	K	A	I	I	A	V	H	L	Y	G	Q	P	A	D	M	D	E	.	.	.	I	K	R	I	A	K	K	Y	N	L	K	L	I	E	D	A	A	Q
Template Known Secondary structure										T	T										T	T	T	T			.	.	.	.		G	G	G	T	G	G	G			T	T									G	G	G	S							.	.	.								T	T								T	T
Template Predicted Secondary structure																											.	.	.	.																															.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G	W	M	V	L	N	G	P	K	K	H	A	K	G	Y	I	E	G	L	E	M	L	.	A	S	M	R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A
Query Conservation																																																															.
Alig confidence										.	.	.	.																																																		.
Template Conservation										.	.	.	.
Template Sequence		A	H	G	S	L	Y	K	G	.	.	.	.	M	K	V	G	S	L	G	D	A	A	G	F	S	F	Y	P	A	K	N	L	G	S	L	G	D	G	G	A	V	V	T	N	D	K	D	L	A	E	K	I	K	A	L	S	N	Y	G	S	E	K	K	Y	H	H	I	Y	K	G	F	N	S	R	L	D	E	L	Q	A
Template Known Secondary structure			T	T				T	T	.	.	.	.			T	T	S	S	S	S								T	T	S	T	T			S	S								S													B	T	T		S	B	T	T	B			S				B
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L	I	N	D	I	P	G	V	S	C	V	K	P	R	G	A	L	Y	M	F	P	K	I	D	A	K	R	F	N	I	H	D	D	Q	K	M	V	L	D	F	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F
Query Conservation
Alig confidence																																																							.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		G	F	L	R	V	K	L	K	Y	L	D	K	W	N	E	E	R	R	K	I	A	Q	K	Y	I	A	G	I	N	N	P	N	V	I	I	P	V	E	A	D	Y	A	K	H	V	W	Y	T	F	V	I	R	S	.	.	.	.	E	K	R	D	E	L	Q	K	Y	L	N	N	N	G	I	G	T	L	I	H	Y	P	I
Template Known Secondary structure																															B	T	T	B	B						T	T						S							.	.	.	.	T	T											T	T	B			B		S		S	S
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		370	.	.	.																						.	.	.	.	.	.	380	.	.			.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query Sequence		N	W	P	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	H	F	R	I	V	T	L	.	.	P	R	V	D	D	I	E	L	S	L	S	K	F	A	R	F
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		P	I	H	L	Q	Q	A	Y	K	D	L	G	F	K	T	G	N	F	P	I	A	E	K	I	A	N	E	I	L	S	I	P	I	W	Y	G	M	K	N	E	E	I	E	Y	V	I	D	K	I	N	A	W
Template Known Secondary structure			G	G	G	S	G	G	G	G	G	G				T	T	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions