Job Description P0A959 Confidence 100.00% Date Thu Jan 5 11:09:27 GMT 2012 Rank 75 Aligned Residues 325 % Identity 18% Template c3fkdC_ PDB info PDB header:lyase Chain: C: PDB Molecule:l-threonine-o-3-phosphate decarboxylase; PDBTitle: the crystal structure of l-threonine-o-3-phosphate2 decarboxylase from porphyromonas gingivalis Resolution 2.50 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	K	L	N	I	G	N	P	A	P	F	G	F	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	S	K	G	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	I	Y	I	G	N	G	V	S	E	L	I	V	Q	A	M	Q	A
Query Conservation
Alig confidence								.	.	.							.																								.												.	.	.	.	.	.
Template Conservation								.	.	.							.																								.												.	.	.	.	.	.
Template Sequence		I	V	N	F	S	T	.	.	.	T	V	W	T	D	G	.	D	D	H	L	E	K	H	L	V	E	N	L	N	C	I	R	H	Y	P	E	P	D	A	.	G	T	L	R	Q	X	L	A	K	R	N	.	.	.	.	.	.	S	V	D	N	N	A	I	L	V	T	N	G	P	T	A	A	F	Y	Q	I	A	Q	A
Template Known Secondary structure						S		.	.	.		S					.											T	G	G	G	G	G	S				T	T		.											T	.	.	.	.	.	.	T			G	G	G					S
Template Predicted Secondary structure								.	.	.							.																								.												.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.				.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	N	S	G	D	E	M	L	V	P	A	P	D	Y	P	L	W	T	A	A	V	S	L	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K	I	T	P	R	T	R	G	I	V	I	I	N	P	N	N	P	T	G	A	V	Y	S	K	E	L	L	M	E	I	V
Query Conservation
Alig confidence			.	.																																							.	.	.	.	.	.	.	.	.																														.
Template Conservation			.	.																																							.	.	.	.	.	.	.	.	.																														.
Template Sequence		F	.	.	R	G	S	R	S	L	I	A	I	P	S	F	A	E	Y	E	D	A	C	R	X	Y	E	H	E	V	C	F	Y	P	S	N	E	D	I	G	E	A	.	.	.	.	.	.	.	.	.	D	F	S	N	X	D	F	C	W	L	C	N	P	N	N	P	D	G	R	L	L	Q	R	T	E	I	L	R	L	.
Template Known Secondary structure		T	.	.	T	T								S												T	T								T	T	S		G	G	G	S	.	.	.	.	.	.	.	.	.			T	T		S						S	S		T	T	T													.
Template Predicted Secondary structure			.	.																																							.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		87			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.										.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G	W	M	V	L	N	G	P	K	K	H	A	K	G	Y	I	E	G	L	E	M	L	A	S	M
Query Conservation
Alig confidence		.																											.	.																																											.	.	.	.	.	.	.
Template Conservation		.																											.	.																																											.	.	.	.	.	.	.
Template Sequence		.	L	N	D	H	P	D	T	T	F	V	L	D	Q	S	Y	V	S	F	T	T	E	E	V	I	R	P	.	.	A	D	I	K	G	R	K	N	L	V	X	V	Y	S	F	S	H	A	Y	G	I	P	G	L	R	I	G	Y	I	V	A	N	K	D	F	X	K	R	V	A	A	F	.	.	.	.	.	.	.	S	T
Template Known Secondary structure		.					T	T	S							T	T	G	G	G		S	S					G	.	.	G	G	G	T	T		S	S							S	T	T	T	S	S		G	G	G																	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																											.	.																																											.	.	.	.	.	.	.
Template SS confidence
			155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.								.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L	I	N	D	I	P	G	V	S	C	V	K	P	R	G	A	L	Y	M	F	P	K	I	D	A	K	R	F	N	I	H	D	D	Q	K	M	V	L	D
Query Conservation
Alig confidence																											.	.	.																								.																	.	.	.	.	.
Template Conservation																											.	.	.																								.																	.	.	.	.	.
Template Sequence		P	W	A	V	N	A	L	A	I	E	A	A	K	F	I	L	I	H	P	A	Q	F	T	L	P	.	.	.	I	R	K	W	Q	R	N	T	V	D	F	I	T	A	L	N	R	L	D	G	V	E	V	.	H	P	S	G	T	T	F	F	L	L	R	L	K	K	G	T	.	.	.	.	.	A	A	E	L	K	K	Y
Template Known Secondary structure		T	T		S																						.	.	.																		S	T	T				.				S	S	S							S	S	S		.	.	.	.	.
Template Predicted Secondary structure																											.	.	.																								.																	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.						.	290	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F	N	W	P	W	P	D	H	F	R	I	V	T	L	P	R	V	D	D	I	E	L	S	L	S	K	F	A	R	F	L	S	G	Y
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		X	L	E	E	Y	N	X	L	I	R	D	A	S	N	F	R	G	L	D	E	S	Y	V	R	I	T	T	Q	.	R	P	A	Q	N	Q	L	F	I	K	A	L	E	T	F	L	E	K	Y
Template Known Secondary structure					T	T								T	T	S	T	T			T	T								.
Template Predicted Secondary structure																														.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions