Job Description P0A959 Confidence 99.83% Date Thu Jan 5 11:09:27 GMT 2012 Rank 205 Aligned Residues 336 % Identity 11% Template c3ecdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei Resolution 1.60 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	L	K	E	A	K	R	L	E	E	E	G	N	K	V	L	K	L	N	I	G	N	P	A	P	F	G	F	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	S	K	G	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	I	Y
Query Conservation
Alig confidence																										.	.	.	.	.															.	.							.	.																			.	.	.
Template Conservation																										.	.	.	.	.															.	.							.	.																			.	.	.
Template Sequence		S	V	R	G	A	I	L	K	E	L	E	R	Q	Q	S	Q	V	E	L	I	A	S	E	N	.	.	.	.	.	I	V	S	R	A	V	L	D	A	Q	G	S	V	L	.	.	T	N	K	Y	A	E	.	.	G	Y	D	E	V	E	A	L	A	I	E	R	V	K	R	L	F	N	.	.	.	A	G	H	A	N	V
Template Known Secondary structure																	S					T	T			.	.	.	.	.											T	S	G	G	.	.	G	S	S		T	T	.	.																	T	T	.	.	.		S
Template Predicted Secondary structure																										.	.	.	.	.															.	.							.	.																			.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	N	G	V	S	E	L	I	V	Q	A	M	Q	A	L	L	N	S	G	D	E	M	L	V	P	A	P	D	Y	P	L	W	T	A	A	V	S	L	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K	I	T	P	R	T	R	G	I	V	I	I	N	P	N	N
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		Q	P	H	S	G	A	Q	A	N	G	A	V	M	L	A	L	A	K	P	G	D	T	V	L	G	M	S	L	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	Q	Y	G	V	S	R	D	T	.	M	L	I	D	Y	D	Q	V	E	A	L	A	Q	Q	H	K	P	S	L	I	I	A	G	F	S	A
Template Known Secondary structure				S	S															T	T											.	.	.	.	.	.	.	.	.	.	.	.	.						B		T	T	T	.		S	B															S							S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.														.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	G	A	V	Y	S	K	E	L	L	M	E	I	V	E	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G	W	M	V	L	N	G	P	K	K
Query Conservation
Alig confidence		.							.	.	.																																					.	.	.	.														.	.
Template Conservation		.							.	.	.																																					.	.	.	.														.	.
Template Sequence		.	Y	P	R	K	L	D	.	.	.	F	A	R	F	R	A	I	A	D	S	V	G	A	K	L	M	V	D	M	A	H	I	A	G	V	I	A	A	G	R	H	A	N	P	V	E	.	.	.	.	H	A	H	V	V	T	S	T	T	H	K	T	L	.	.	R	G	P	R	G	G	F	V	L	T	N	D	E	E	I
Template Known Secondary structure		.		S	S				.	.	.											T	T								T	T	T						T	T	S	S			G	G	G	.	.	.	.	T		S						S	S	G	G	G	.	.		S		S							S
Template Predicted Secondary structure		.							.	.	.																																					.	.	.	.														.	.
Template SS confidence
			182	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	K	G	Y	I	E	G	L	E	M	L	A	S	M	R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L	I	N	D	I	P	G	V	S	C	V	K	P	R	G	A	L	Y	M	F	P	K	I	D
Query Conservation
Alig confidence								.	.	.	.	.	.	.																																.	.	.
Template Conservation								.	.	.	.	.	.	.																																.	.	.
Template Sequence		A	K	K	I	N	S	.	.	.	.	.	.	.	A	V	G	P	L	M	H	V	I	A	G	K	A	V	A	F	G	E	A	L	T	D	D	F	K	T	Y	I	D	R	V	.	.	.	L	A	N	A	Q	A	L	G	D	V	L	K	A	G	G	V	D	L	V	T	G	G	T	D	N	H	L	L	L	V	D	L	R
Template Known Secondary structure								.	.	.	.	.	.	.																				T	S											.	.	.														T	T				G	G	G	S		S	S	S							G
Template Predicted Secondary structure								.	.	.	.	.	.	.																																.	.	.
Template SS confidence
		252	.	.	.	.	.								.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.					.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.							380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.																	.	.	.	.	.	.
Query SS confidence																										.	.	.	.																	.	.	.	.	.	.
Query Sequence		A	K	R	F	N	I	H	D	D	Q	K	M	V	L	D	F	L	L	Q	E	K	V	L	L	.	.	.	.	V	Q	G	T	A	F	N	W	P	W	P	D	H	F	R	I	.	.	.	.	.	.	V	T	L	P	R	V	D	D	I	E	L	S	L	S	K	F	A	R	F	L	S	G	Y	H	Q	L
Query Conservation																										.	.	.	.																	.	.	.	.	.	.
Alig confidence						.	.	.	.																	.	.	.	.																	.	.	.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		P	K	G	L	.	.	.	.	K	G	A	Q	V	E	Q	A	L	E	R	A	G	I	T	C	N	K	N	G	I	P	F	D	P	E	K	P	T	I	T	S	G	I	R	L	G	T	P	A	G	T	T	R	G	F	G	A	A	E	F	R	E	V	G	R	L	I	L	E	V	F	E	A	L	R	T	N
Template Known Secondary structure		G	G	T		.	.	.	.												T	T									T	T		S	S		T	T	T		S												T	T																					T	T
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		328	.	330	.					.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions