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Job DescriptionP0A959
Confidence99.94%DateThu Jan 5 11:09:27 GMT 2012
Rank128Aligned Residues337
% Identity12%Templatec2yrrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:aminotransferase, class v; PDBTitle: hypothetical alanine aminotransferase (tth0173) from thermus2 thermophilus hb8
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100.........110....
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Query Sequence  VLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQA
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Template Sequence  MLLLTPG. . . . . PTPIPERVQKALLRPMRGHLDPEVLRVNRAIQERLAALF. . . . DPGEGALVAALAGSGSLGMEAGLAN
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SSS.....S



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   1...... ..10.........20.........30.........40...... ...50.........60.........70.
 
   115....120.........130.........140.........150.........160......... 170.........180.........190...
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Query Sequence  LLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRT. RGIVIINPNNPTGAVYSKELLMEI
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Template Sequence  LDRGPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPGE. . PVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEA. . . I
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   72.......80.........90.........100......... 110.........120.........130.........140..... .
 
   194.....200.........210.........220.........230.........240.........250.........260.. .
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Query Sequence  VEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAK. . . . . . . . . . G
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Template Sequence  GALAKEAGALFFLDAVTTLGMLP. . . . . . . FSMRAMGVDYAFTGSQKCLSAPP. GLAPIAASLEARKAFTGKRGWYLDLA
Template Known Secondary structure  T

TTTTTTS
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   147..150.........160......... 170.........180.........190.. .......200.........210........
 
   264.....270.........280.........290.........300.........310.........320.........330.........340...
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Query Sequence  YIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYMFPKIDAKRF
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Template Sequence  RVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGV.
Template Known Secondary structure  TT


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   219220.........230.........240.........250.........260.........270.........280.........290.......
 
   344.....350.........360.........370.........380 .........390.........400
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Query Sequence  NIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIV. . . TLPRVDDIELSLSKFARFLS
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Template Sequence  . . . . DADRLVRALYAEGVAVAGGIGPTR. . GQVLRLGLMGEGARREAYQAFLKALDRALA
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TT


GGGT..TT

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   298.300.........310.........320. ........330.........340.........350.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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