Phyre 2 alignment of P0A959 with c2ordA

Job Description P0A959
Confidence 99.95% Date Thu Jan 5 11:09:27 GMT 2012

Rank 107 Aligned Residues 344

% Identity 14% Template c2ordA_

PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution

Resolution 1.40 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	E	G	N	K	V	L	K	L	N	I	G	N	P	A	P	F	G	F	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	S	K	G	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	I	Y	I	G	N	G	V	S	E	L	I	V
Query Conservation
Alig confidence																																					.																										.	.	.	.
Template Conservation																																					.																										.	.	.	.
Template Sequence	E	K	G	N	A	Y	L	D	F	T	S	G	I	A	V	N	V	L	G	H	S	H	P	R	L	V	E	A	I	K	D	Q	A	E	K	L	.	I	H	C	S	N	L	F	W	N	R	P	Q	X	E	L	A	E	L	L	S	K	N	T	F	G	.	.	.	.	G	K	V	F	F	A	N	T	G	T	E	A	N	E
Template Known Secondary structure	T	T							S	S					T		T	T		B	T																.	S				T	T	S															T	T	T	S	.	.	.	.							S	S
Template Predicted Secondary structure																																					.																										.	.	.	.
Template SS confidence
	25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.

	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.																												.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.																												.	.	.	.	.	.
Query Sequence	Q	A	M	Q	A	L	.	.	.	.	.	.	.	L	N	S	G	D	E	M	L	V	P	A	P	D	Y	P	L	W	T	A	A	V	S	L	S	S	G	K	.	.	.	.	.	.	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K	I	T	P	R	T	R	G	I	V	I	I	N
Query Conservation							.	.	.	.	.	.	.																												.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence	A	A	I	K	I	A	R	K	Y	G	K	K	K	S	E	K	K	Y	R	I	L	S	A	H	N	S	F	H	G	R	T	L	G	S	L	T	A	T	G	Q	P	K	Y	Q	K	P	F	E	P	L	V	P	G	F	E	Y	F	E	F	N	N	V	E	D	L	R	R	K	X	S	E	D	V	C	A	V	F	L	E	P
Template Known Secondary structure															T	T								B	T					S	S							S	B						G	G	G		S			T	T						T	T											T	T								S
Template Predicted Secondary structure
Template SS confidence
	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

	177	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence	P	N	N	P	T	G	.	A	V	Y	S	K	E	L	L	M	E	I	V	E	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G	W	M	V	L	N
Query Conservation							.
Alig confidence							.																																							.	.	.	.																					.
Template Conservation																																														.	.	.	.																					.
Template Sequence	I	Q	G	E	S	G	I	V	P	A	T	K	E	F	L	E	E	A	R	K	L	C	D	E	Y	D	A	L	L	V	F	D	E	V	Q	C	G	X	G	R	T	G	K	L	F	.	.	.	.	A	Y	Q	K	Y	G	V	V	P	D	V	L	T	T	A	K	G	L	G	G	.	G	V	P	I	G	A	V	I	V	N
Template Known Secondary structure				T	T	T																				T								T	T	T	T	T	T	T	T	S	S	S	S	.	.	.	.						T				S						G	G	G	G	T	.	T	S
Template Predicted Secondary structure																																														.	.	.	.																					.
Template SS confidence
	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.

	256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	P	K	K	H	A	K	G	Y	I	E	G	L	E	M	L	A	S	M	R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L	I	N	D	I	P	G	V	S	C	V	K	P	R	G	A	L	Y	M	F
Query Conservation
Alig confidence							.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence	E	R	A	N	V	L	.	.	.	.	.	.	E	P	G	D	H	G	T	T	F	G	G	N	P	L	A	C	R	A	G	V	T	V	I	K	E	L	T	K	E	G	F	L	E	E	V	E	E	K	G	N	Y	L	X	K	K	L	Q	E	X	K	E	E	Y	D	V	V	A	D	V	R	G	X	G	L	X	I	G	I
Template Known Secondary structure	S	T	T				.	.	.	.	.	.		T	T	S	S			S	S	T	T																T	S	T	T																								T	T								T	T
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
	255	.	.	.	.	260							.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

	336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.			380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence	P	K	I	D	A	K	R	F	N	I	H	D	D	Q	K	M	V	L	D	F	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F	N	W	P	W	P	D	H	F	R	I	.	.	V	T	L	P	R	V	D	D	I	E	L	S	L	S	K	F	A	R	F	L	S	G
Query Conservation																																													.	.
Alig confidence		.	.	.	.	.	.																									.	.	.	.	.	.								.	.
Template Conservation		.	.	.	.	.	.																									.	.	.	.	.	.
Template Sequence	Q	.	.	.	.	.	.	F	R	E	E	V	S	N	R	E	V	A	T	K	C	F	E	N	K	L	L	V	V	P	A	.	.	.	.	.	.	G	N	N	T	I	R	F	L	P	P	L	T	V	E	Y	G	E	I	D	L	A	V	E	T	L	K	K	V	L	Q	G
Template Known Secondary structure		.	.	.	.	.	.			T	T	S												T	T							.	.	.	.	.	.	T	T	T								T	T																			T
Template Predicted Secondary structure		.	.	.	.	.	.																									.	.	.	.	.	.
Template SS confidence
	329							330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.							.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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