Job Description P0A959 Confidence 24.84% Date Thu Jan 5 11:09:27 GMT 2012 Rank 368 Aligned Residues 170 % Identity 11% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		V	C	Y	D	I	R	G	P	V	L	K	E	A	K	R	L	E	E	E	G	N	K	V	L	K	L	N	I	G	N	P	A	P	F	G	F	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	Q	G	Y	C	D	S	K	G	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	.	M	R
Query Conservation																																																																															.
Alig confidence																														.	.																									.	.	.	.	.	.	.																	.
Template Conservation																														.	.																									.	.	.	.	.	.	.
Template Sequence		V	G	Y	P	D	Y	E	T	S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	.	.	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	.	.	.	.	.	.	.	R	F	E	D	V	L	E	L	S	E	T	L	R	K	E	F	P	D	I
Template Known Secondary structure		T	T	S	S															T	T		S							.	.			S			T	T	S														T	T		.	.	.	.	.	.	.																	T	T	S
Template Predicted Secondary structure																														.	.																									.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure												.	.	.																			.													.	.	.
Query SS confidence												.	.	.																			.													.	.	.
Query Sequence		D	V	T	V	E	D	I	Y	I	G	.	.	.	N	G	V	S	E	L	I	V	Q	A	M	Q	A	L	L	N	S	G	.	D	E	M	L	V	P	A	P	D	Y	P	L	.	.	.	W	T	A	A	V	S	L	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	D	L	D	D	I	R	A	K
Query Conservation												.	.	.																			.													.	.	.
Alig confidence				.	.	.	.					.	.	.																			.													.	.	.																				.	.	.	.	.
Template Conservation				.	.	.	.																																																													.	.	.	.	.
Template Sequence		P	F	.	.	.	.	L	L	M	T	Y	Y	N	P	I	F	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	P	D	L	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P	L	G	A	P	T	.	.	.	.	.	S	T	R	K	R	I	K	L	I
Template Known Secondary structure				.	.	.	.																								T	T							T	T																T	T									T	T	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.																																																													.	.	.	.	.
Template SS confidence
		96	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	P	R	T	R	G	I	V	I	I	N	P	N	N	P	T	G	A	V	Y	S	K	E	L	L	M	E	I	V	E	I	A	R	Q	H	N	L	I	I	F	A
Query Conservation
Alig confidence																				.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		C	E	A	A	D	E	M	T	Y	F	V	S	V	T	G	Y	E	R	.	.	.	.	.	.	I	K	K	K	V	E	E	Y	R	E	L	C	D	K	P	V	V	V
Template Known Secondary structure						S	S						S	S						.	.	.	.	.	.														S
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions