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Job DescriptionP0A959
Confidence99.89%DateThu Jan 5 11:09:27 GMT 2012
Rank177Aligned Residues345
% Identity13%Templatec2e7uA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from2 thermus thermophilus hb8
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  EGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQ
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Template Sequence  DGNRYLDYVMSWGPLILGHAHPKVLARVRETLER. . . GLTFGAPSPLEVALAKKVKRAYP. . . FVDLVRFVNSGTEATMS
Template Known Secondary structure  T

SSGGGTT
TT
BT
T...
S

SS


T...T

SS
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   50.........60.........70.........80... ......90.........100...... ...110.........120...
 
   111...... ..120.........130...... ...140.........150.........160........
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Query Sequence  AMQALLN. . SGDEMLVPAPDYPLWTAAV. . . . . . . . . . . . . . . . . . . . SLSSGKAVHYLCDESSDWFPDLDDIRAKITPR
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Template Sequence  ALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEYND. . . . PEGLREVLKRRGEE
Template Known Secondary structure 


TT





GGGS

SSS

B
SSTT

TT
TT
....GGG
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   124.....130.........140.........150.........160.........170.........180..... ....190.........
 
   169170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  TRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFR
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Template Sequence  IAAIIFEPVVGNAGVLVPTEDFLKALHEAKAYGVLLIADEVMTGFRLAFG. . . . . GATELLGLKPDLVTLGKILG. GGLP
Template Known Secondary structure 
SSB
TTS
B


GGGGT

TTTTTTSSTT.....T


S
GGGG.TTSS
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   200.........210.........220.........230.........240......... 250.........260......... 270...
 
   249250.........260.........270.........280.........290.........300.........310.........320........
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Query Sequence  QGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKP
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Template Sequence  AAAYAGRREIMEKV. . APLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVN
Template Known Secondary structure 

TTB..TTTSSB



TT
S

TTT


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   274.....280....... ..290.........300.........310.........320.........330.........340.........350.
 
   329330.........340.... .....350.........360.........370.........380.........390.........
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Query Sequence  RGALYMFPKIDAKRFN. . . . . . . . IHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSLSKFARFL
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Template Sequence  RVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPS. . . . . . NFEAAFLSVAHREEDVEKTLEALRKAL
Template Known Secondary structure  TTSSSS


STTS
TTT

SS......SSS


TT


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   352.......360.........370.........380.........390....... ..400.........410.........420....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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