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Job DescriptionP0A959
Confidence99.94%DateThu Jan 5 11:09:27 GMT 2012
Rank126Aligned Residues356
% Identity15%Templatec2dkjB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of t.th.hb8 serine hydroxymethyltransferase
Resolution1.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.. .......70.........80.........90.
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Query Sequence  PVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNL. . . . . . . . PTAQGYCDSKGLYSARKAIMQHYQARGMR
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Template Sequence  ALFELIALEEKRQREGLELIASEN. . . . . FVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA
Template Known Secondary structure  S

TT

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TSGGGG



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   10.........20.........30... ......40.........50.........60.........70.........80....
 
   92.......100.........110.........120.........130 .........140.........150. ........160.......
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Query Sequence  DVTVEDIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYP. . . LWTAAVSLSSGKAVHYLCDES. SDWFPDLDDIRAKITP
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Template Sequence  . . AWANVQPHSG. SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALE
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   85....90.... .....100.........110.........120.........130.........140.........150.........160.
 
   168.170.........180.........190.........200.........210.........220.........230.........240.......
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Query Sequence  RTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGF
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Template Sequence  HRPKVIVAGASAYPRFW. . . . DFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL. . . . PYAHVVTSTTHKTL. . RGP
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   162.......170........ .180.........190.........200.........210.... .....220........ .230.
 
   248.250.........260.........270.........280.........290.........300.........310.........320.......
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Query Sequence  RQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVK
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Template Sequence  RGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQ. . . . PEFKEYSRLVVENAKRLAEELARRGYRIVTG
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   232.......240.........250.........260.........270...... ...280.........290.........300.......
 
   328.330.........340.........350.........360.........370.... .....380 .........390.......
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Query Sequence  PRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWP. . . . DHFRIV. . . . . . TLPRVDDIELSLSKFAR
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Template Sequence  GTDNHLFLVDLRPKG. . . . LTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR
Template Known Secondary structure  S
SSS
GGGT....

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   308.310.........320.. .......330.........340.........350.........360.........370.........380...
 
   398.400.
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Query Sequence  FLSG
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Template Sequence  ALLE
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   384...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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