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Job DescriptionP0A959
Confidence100.00%DateThu Jan 5 11:09:27 GMT 2012
Rank9Aligned Residues368
% Identity16%Templatec1ynuA_
PDB info PDB header:lyaseChain: A: PDB Molecule:1-aminocyclopropane-1-carboxylate synthase; PDBTitle: crystal structure of apple acc synthase in complex with l-vinylglycine
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNL. . . . . . . . . PTAQGYCDSKGLYSARKAIMQHYQARGM. . RDVTVEDI
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Template Sequence  HNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHL
Template Known Secondary structure  TBTTSB
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TT
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   99100.........110.........120.........130......... 140.........150.........160....... ..170.
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Query Sequence  YIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLS. SGKAVHYLCDESSDWFPDLDDIRAKITP. . . . . . RTRG
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Template Sequence  VLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKG
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TTTTTTT




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   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   172.......180.........190.........200.........210.........220...... ...230.........240.......
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Query Sequence  IVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPL. . . . APDLLTITFNGLSKTYRVAGF
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Template Sequence  VLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDSEVWQRVHVVYSLSKDLGLPGF
Template Known Secondary structure  SS
TTT




T

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   195....200.........210.........220.........230.........240.........250.........260.........270....
 
   248.250.........260.........270.........280.........290.........300.........310.........320.......
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Query Sequence  RQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVK
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Template Sequence  RVGAIYSNDDMVVAAATKMS. . . . . . SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLN
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   281........290.........300 .........310.........320.........330.........340.........350....
 
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Query Sequence  PRGALYMFPKIDAKRFNIH. . DDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTL. PRVDDIELSLSKFARFLSGYH
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Template Sequence  GNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEYY
Template Known Secondary structure 

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GGG
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   355....360.........370.........380.........390.........400.........410.........420.........430...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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