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Job DescriptionP0A959
Confidence99.86%DateThu Jan 5 11:09:27 GMT 2012
Rank201Aligned Residues318
% Identity13%Templatec1i41J_
PDB info PDB header:lyaseChain: J: PDB Molecule:cystathionine gamma-synthase; PDBTitle: cystathionine gamma-synthase in complex with the inhibitor2 appa
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70... ......80.........90.........100.........110.........120.
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Query Sequence  APFGFDAPDEILVDVIRNLPTAQGYCDSKG. . LYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGDE
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Template Sequence  SAYFFNKTSE. LIDFKEKRRASFEYGRYGNPTTVVLEEKISALE. . . . . . . . GAESTLLMASGMCASTVMLLALVPAGGH
Template Known Secondary structure  SB


S
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BGGG

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SSSS
TT
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   85....90.... .....100.........110.........120....... ..130.........140.........150.....
 
   122.......130......... 140.........150.........160...... ...170.........180.........190......
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Query Sequence  MLVPAPDYPLWTAAVSLS. . . . SGKAVHYLCDESSDWFPDLDDIRAKIT. PRTRGIVIINPNNPTGAVYSKELLMEIVEI
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Template Sequence  IVTTTDCYRKTRIFIETILPKMGITATVIDPA. . . . . . . DVGALELALNQKKVNLFFTESPTNPFLRCVDIEL. . . VSKL
Template Known Secondary structure  SS

TGGGGT

SS.......
S

SS
TTT




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   156...160.........170.........180....... ..190.........200.........210.........220. ....
 
   197..200.........210.........220.........230.........240........ .250.........260.........270.....
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Query Sequence  ARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFR. QGWMVLNGPKKHAKGYIEGLEMLASMR
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Template Sequence  CHEKGALVCIDGTFATPLNQKA. . . . . . . . LALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNP
Template Known Secondary structure  TT

TTT

T........TTTT
STTTTTT
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T



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   226...230.........240....... ..250.........260.........270.........280.........290.......
 
   276...280.........290.........300.........310.........320...... ...330.........340.
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Query Sequence  LCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCV. . . . . . . . . . . . . . KPRGALYMFPKIDAK
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Template Sequence  . . . . . . . . NAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD
Template Known Secondary structure  ........TT
SS
TTSTTSTT
S


SSS
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   298.300.........310.........320.........330.........340.........350.........360.........
 
   342.......350.........360.........370... ......380.........390.........400
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Query Sequence  RFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPW. . . . . . . . . . . . . . . . . . . . . PDHFRIVTLPRVDDIELSLSKFARFLS
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Template Sequence  L. . . . LTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGV. . EDFDDLKADILQALD
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SSSSS


SSS

TTS
TTT

SS


S..S
T
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   370 .........380.........390.........400.........410.........420........ .430.........440...
 
   401.
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Query Sequence  GY
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Template Sequence  SI
Template Known Secondary structure  T
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   444.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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