Return to main results Retrieve Phyre Job Id

Job DescriptionP00968
Confidence99.36%DateThu Jan 5 10:57:25 GMT 2012
Rank87Aligned Residues124
% Identity20%Templated1vmda_
SCOP infoMethylglyoxal synthase-like Methylglyoxal synthase-like Methylglyoxal synthase, MgsA
Resolution2.06

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   938.940.........950.........960....... ..970.........980.... .....990....... ..1000.........1010...
Predicted Secondary structure 










..




.







.




Query SS confidence 





























. .
















.












.















Query Sequence  TMKKHGRALLSVREGDKERVVDLAAKLLKQ. . GFELDATHGTAIVLGEA. GINPRLVNKVHEG. RPHIQDRIKNGEYTYI
Query Conservation    
  
          
         
   ..
    

 

   
   .

    
      .            
  
Alig confidence 





























..
















.












.















Template Conservation       
 






  
  

 

     

    
 





  
 

 

 
    






 



 
  
 

 
Template Sequence  FMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYATGTTGALLQEKLGLKVHRLKSGPLGGDQQIGAMIAEGKIDVL
Template Known Secondary structure 
SS

GGGSTTS





S
GGGTTTS

Template Predicted Secondary structure 






























Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70.........80.........90
 
   1014 .... .1020.........1030.........1040.........1050.........1060.
Predicted Secondary structure  ..


.
















Query SS confidence 
. .



.










































Query Sequence  I. . NTTS. GRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEK
Query Conservation 
..
   .           

 
        
    
              
Alig confidence 
..



.










































Template Conservation 


 


   

  

 

 
 
 
 


 


 


  

 
 
      
Template Sequence  IFFWDPLEPQAHDVDVKALIRIATVYNIPVAITRSTADFLISSPLMNDVYE
Template Known Secondary structure 

SSS

TTS

TT

SSSGGGGS
Template Predicted Secondary structure 



















Template SS confidence 


















































   91........100.........110.........120.........130.........140.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions