|   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
|
|
|
. | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | R | R | R | F | D | V | A | M | K | K | I | G | L | E | T | A | R | S | G | I | A | H | . |
. |
. |
. |
T | M | E | E | A | L | A | V | A | A | D | V | G | F | P | C | I | I | R | P | S | F | T | M | G | G | S | G | G | G | I | A | Y | N | R | E | E | F | E | E | I | C | A | R | G | L | D | L | S | P | T | K | E |
Query Conservation |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|   |
|   |   |
|   | . | . | . | . |
|   |
|
|
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|   |
|
|   |
|
|   |
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
Template Sequence |   |
D | K | A | L | T | K | E | L | L | T | V | N | G | I | R | N | T | K | Y | I | V | V | D | P | E | S | A | N | N | W | S | W | D | K | I | V | A | E | L | G | N | I | V | F | V | K | A | A | N | Q | G | S | S | V | G | I | S | R | V | T | N | A | E | E | Y | T | E | A | L | S | D | S | F | Q | Y | . |
. |
D | Y | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|
|  |  |  |  |
| T | T | G | G | G | G |
|
|  |  |  |  |  |  |  |  |
| S |
|  |  |  |  |  | S | S |
|
| T | T | T | T |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |  | T | T | T | . | . |
| S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
|
210 | . | . |
  |
  |   |
204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | I | D | E | S | L | I | G | W | K | E | Y | E | M | E | V | V | R | D | K | N | D | N | C | I | I | V | C | S | I | E | N | F | D | A | M | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | H | T | G | D | S | I | T | V | A | P | A | Q | T | L | T | D | K | E | Y | Q | I | M | R | N | A | S | M | A | V | L | R |
Query Conservation |   |
|
|
|
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |
|   |
|   |   |   |
|   |   |
|
|   |
| . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|
|
|   |
|
|
|
|   |
|
|   |
|   |   |   |   |   |
|
|   |   |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
V | L | I | E | E | A | V | N | G | A | R | E | L | E | V | G | V | I | G | N | D | Q | P | L | V | S | E | I | G | A | H | T | V | P | N | Q | G | S | G | D | G | W | Y | D | Y | N | N | K | F | V | D | N | S | A | V | H | F | Q | I | P | A | Q | L | S | P | E | V | T | K | E | V | K | Q | M | A | L | D | A | Y | K |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|
| S |
|  |  |  |  |  |  |  |  | S | S | S |
|  |  |  |  |  |  |  |  |  |
| T | T | S | S | S | S | S |
|
|
|
|  |  |  |  | T | T |
|
| T | T |
|  |  |  | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . |
  |
  |   |
274 | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | |
|
. | . | . | . | . | . | 310 | |
|
. | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . |
|
|
|
|
|  |  | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | I | G | V | E | T | G | G | S | N | V | Q | F | A | V | N | P | K | N | G | R | L | I | V | I | E | M | N | P | R | . |
. |
V | S | R | S | S | A | L | . |
. |
A | S | K | A | T | G | F | P | I | A | K | V | A | A | K | L |
Query Conservation |   |
  |
|
|
|   |   |
|   |   |
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   | . |
|   |   |   |
|
|   |   |   |
|   | . |   |
|   |   |   |
|
|
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|
Template Sequence |   |
V | L | N | L | R | . |
G | E | A | R | M | D | F | L | L | D | E | . |
N | N | V | P | Y | L | G | E | P | N | T | L | P | G | F | T | N | M | S | L | F | K | R | L | W | D | Y | S | D | I | N | N | A | K | L | V | D | M | L |
Template Known Secondary structure |   |
 | T | T |
|
| . |  |  |  |  |  |  |  |  |  |
| T | . | T |
|
|  |  |  |  |  |  |  | S | S |
|
|
| S | T | T |
| G | G | G | T | G | G | G | G | G | T |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
293 | . | . | . | . | |
. | . | 300 | . | . | . | . | . | . | . | . | |
. | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . |
  |