Job Description P00968 Confidence 100.00% Date Thu Jan 5 10:57:25 GMT 2012 Rank 31 Aligned Residues 352 % Identity 16% Template c3uvzB_ PDB info PDB header:lyase Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit; PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase, atpase2 subunit from burkholderia ambifaria Resolution 2.20 Å

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		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.		.	.	620	.	.	.	.	.	.	.	.	.	630	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		N	P	S	T	D	R	E	K	I	M	V	L	G	G	G	P	N	R	I	G	Q	G	I	E	F	D	Y	C	C	V	H	A	S	L	A	L	R	E	D	G	Y	E	T	I	M	V	N	C	N	P	E	T	V	S	T	D	Y	D	T	S	D	R	L	Y	.	F	E	P	V	T	L	E	D	V	L	E	I	V	R	I
Query Conservation																																																																		.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.																													.	.						.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Sequence		S	P	I	L	P	G	A	W	L	G	M	V	G	G	G	Q	L	G	.	.	.	.	.	.	.	.	.	.	.	R	M	F	C	F	A	A	Q	S	M	G	Y	R	V	A	V	L	D	P	D	P	A	S	P	A	G	A	V	.	.	A	D	R	H	L	R	A	A	Y	D	D	E	A	A	L	A	E	L	A	G	L
Template Known Secondary structure						T	T									S				.	.	.	.	.	.	.	.	.	.	.										T	T								S		T	T		T	T	T	T	T	.	.	S	S					S		T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																													.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.												.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		633	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	P	K	G	V	I	V	Q	Y	G	G	Q	T	P	L	K	L	A	R	A	L	E	A	A	G	V	P	V	I	G	T	S	P	D	A	I	D	R	A	E	D	R	E	R	F	Q	H	A	V	E	R	L	K	L	K	Q	P	A	N	A	T	V	T	A	I	E	M	A	V	E	K	A	K	E	I	G	Y	P	L
Query Conservation
Alig confidence		.	.											.	.	.																																																										.
Template Conservation		.	.											.	.	.																																																										.
Template Sequence		.	.	C	E	A	V	S	T	E	F	E	N	.	.	.	V	P	A	A	S	L	D	F	L	A	R	T	T	F	V	A	P	A	G	R	C	V	A	V	A	Q	D	R	I	A	E	K	R	F	I	E	A	S	G	V	P	V	A	P	H	V	V	I	E	S	A	A	A	L	A	A	L	.	D	D	A	A	L	D	A
Template Known Secondary structure		.	.		S					S		T	T	.	.	.	S										T	T	S			S	S										S											T	T			B		S						S						T		.							T
Template Predicted Secondary structure		.	.											.	.	.																																																										.
Template SS confidence
				76	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.
		713	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.		770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		V	V	R	P	S	Y	V	L	G	G	R	A	M	E	I	V	Y	D	E	A	D	L	R	R	Y	F	Q	T	A	V	S	V	S	N	D	A	P	V	L	L	D	H	F	L	D	D	A	V	E	V	D	V	D	A	I	C	D	.	G	E	M	V	L	I	G	G	I	M	E	H	I	E	Q	A	G	V	H	S	G	D
Query Conservation																																																											.
Alig confidence																															.	.	.	.																									.																			.	.	.
Template Conservation																															.	.	.	.																																												.	.	.
Template Sequence		V	L	P	G	I	L	K	T	A	R	K	G	Q	V	R	V	S	T	A	R	E	A	R	D	A	H	A	A	L	.	.	.	.	G	G	V	P	C	V	L	E	K	R	L	P	L	K	Y	E	V	S	A	L	I	A	R	G	A	D	G	R	S	A	A	F	P	L	A	Q	N	V	H	H	N	G	I	.	.	.	L
Template Known Secondary structure		T		S															S											T	.	.	.	.	T	T																							T	T	S														T	T		.	.	.
Template Predicted Secondary structure																															.	.	.	.																																												.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.
		792	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.		.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		S	A	C	S	L	P	A	Y	T	L	S	Q	E	I	Q	D	V	M	R	Q	Q	V	Q	K	L	A	F	E	L	Q	V	R	G	L	M	N	V	Q	F	A	V	K	.	N	N	E	V	Y	L	I	E	V	N	P	R	A	A	R	T	V	P	F	V	S	K	A	T	G	V	P	L	A	K	V	A	A	R	V	M	A
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		A	L	T	I	V	P	A	P	A	A	D	T	A	R	V	E	E	A	Q	Q	A	A	V	R	I	A	D	T	L	G	Y	V	G	V	L	C	V	E	F	F	V	L	E	D	G	S	F	V	A	N	E	M	A	P	R	P	H	N	S	G	H	Y	T	V	D	A	C	A	T	S	Q	F	E	Q	Q	V	R	A	M	T
Template Known Secondary structure							S		S	S																					T													T	T	S									S	S			G	G	G	T	T					B	S	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		871	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890																						.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	S	L	A	E	Q	G	V	T	K	E	V	I	P	P	Y	Y	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	V	V	L	P	F	N	K	F	P	G	V	D	P	L	L	G	P	E	M	R	S	T	G	E	V	M	G	V	G	R	T	F	A	E	A	F	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation																																																																.	.	.
Template Sequence		R	M	P	L	G	N	P	R	Q	H	S	P	A	A	M	L	N	I	L	G	D	V	W	F	P	N	G	A	A	A	G	A	V	T	P	P	W	D	T	V	A	A	M	P	A	A	H	L	H	L	Y	G	K	E	E	A	R	V	G	R	K	M	.	.	.	G	H	V	N	F	T	A	E	M	R	D	D	A	V	A
Template Known Secondary structure		T								B		S									G	G	G	G		T	T		T	T	S													S	T	T									S				T	T				.	.	.								S	S
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.				370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		930	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	Q	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	T	A	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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