 |
Job Description | P00968 | Confidence | 100.00% | Date | Thu Jan 5 10:57:25 GMT 2012 |
Rank | 47 | Aligned Residues | 298 |
% Identity | 19% | Template | c3se7A_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:vana; |
PDBTitle: ancient vana
|
Resolution | 3.07 Å |
|
 |
  |   |
558 | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | |
|
|
580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
D | R | E | K | I | M | V | L | G | G | G | P | N | R | I | G | Q | G | I | E | F | D | . |
. |
. |
Y | C | C | V | H | A | S | L | A | L | R | E | D | G | Y | E | T | I | M | V | N | C | N | P | E | T | V | S | T | D | Y | D | T | S | D | R | L | Y | F | E | P | V | T | L | E | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |
|
|
| . | . | . |
|   |   |
|   |   |
|   |
|
|
|   |   |
|   |   |
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|   |   |
|   | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
| . | . | . | . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|
|
|
|   |
|
|   | . |
| . | . | . | . |
|   |
|   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | H | M | K | I | G | I | I | F | . |
G | . |
. |
. |
. |
G | V | S | E | E | H | D | I | S | V | K | S | A | R | E | V | A | T | H | L | G | T | G | V | F | E | P | F | Y | L | G | I | T | K | S | G | A | W | Q | L | C | D | G | P | G | E | N | W | E | D | G | N | C | R | P | A | V | L | S | P | D | R | S | V | H |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  | . |  | . | . | . | . |
| S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | T |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  | S |
| S | S | S | S | S | S | S | S |
|
|  |  |  |  |  |
|
|
| T | T | T |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  | . |
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|