Return to main results Retrieve Phyre Job Id

Job DescriptionP00968
Confidence95.32%DateThu Jan 5 10:57:25 GMT 2012
Rank151Aligned Residues89
% Identity16%Templatec3nklA_
PDB info PDB header:oxidoreductase/lyaseChain: A: PDB Molecule:udp-d-quinovosamine 4-dehydrogenase; PDBTitle: crystal structure of udp-d-quinovosamine 4-dehydrogenase from vibrio2 fischeri
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   558.560.........570.........580.........590....... ..600.........610.........620.........630.....
Predicted Secondary structure 

















..















Query SS confidence 







































. .





































Query Sequence  DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETI. . MVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKP
Query Conservation     







  


   



  
  
 


  
  

.. 

 









 

 





  
 

 
   
  
Alig confidence 










...........

















..


















.....













Template Conservation 
   




 
...........  
  
   
       


  
              
 .....    
        
Template Sequence  AKKKVLIYGAG. . . . . . . . . . . SAGLQLANXLRQGKEFHPIAFIDDDRKKHKTTXQGITIY. . . . . RPKYLERLIKKHCI
Template Known Secondary structure 



S...........SSS
S
GGGTT
TT.....
GGGT
Template Predicted Secondary structure 






...........














.....





Template SS confidence 















































































   0.........10 .........20.........30.........40......... 50.........60...
 
   636...640........ .650.........660..
Predicted Secondary structure 




...


Query SS confidence 












. . .













Query Sequence  KGVIVQYGGQTPL. . . KLARALEAAGVPVI
Query Conservation 



   


   ... 

  

  

 

Alig confidence 












...













Template Conservation 
 



           

       
 
 
Template Sequence  STVLLAVPSASQVQKKVIIESLAKLHVEVL
Template Known Secondary structure 


TTS
TTT
Template Predicted Secondary structure 









Template SS confidence 





























   64.....70.........80.........90...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions