Job Description P00968 Confidence 100.00% Date Thu Jan 5 10:57:25 GMT 2012 Rank 8 Aligned Residues 386 % Identity 21% Template c3n6rK_ PDB info PDB header:ligase Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) Resolution 3.20 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.									.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.
Query Sequence		K	S	I	L	I	L	G	A	G	P	I	V	I	G	Q	A	C	E	F	D	Y	S	G	A	Q	A	C	K	A	L	R	E	E	G	Y	R	V	I	L	V	N	S	N	P	A	T	I	M	T	D	P	E	M	A	D	A	T	Y	I	E	P	.	.	.	.	.	.	.	.	I	H	W	E	V	V	R	K	I	I	E
Query Conservation																																																															.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	I	L	I	A	N	R	G	E	I	A	C	.	.	.	.	.	.	.	.	.	.	.	R	V	I	K	T	A	R	K	M	G	I	S	T	V	A	I	Y	S	D	A	D	K	Q	A	L	H	V	Q	M	A	D	E	A	V	H	I	G	P	P	P	A	N	Q	S	Y	I	V	I	D	K	V	M	A	A	I	R
Template Known Secondary structure				B		B	S								.	.	.	.	.	.	.	.	.	.	.							G	G	G	S			B						S	T	T	S	S							S	S						S	S	S	S	G	G	G	T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.												.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		K	E	R	P	D	A	V	L	P	T	M	G	G	Q	T	A	L	N	C	A	L	E	L	E	R	Q	G	V	L	E	E	F	G	V	T	M	I	G	A	T	A	D	A	I	D	K	A	E	D	R	R	R	F	D	V	A	M	K	K	I	G	L	E	T	A	R	S	G	.	.	I	A	H	T	M	E	E	A	L	A
Query Conservation																																																																						.	.
Alig confidence														.	.	.												.	.																																									.	.
Template Conservation														.	.	.												.	.
Template Sequence		A	T	G	A	Q	A	V	H	P	G	Y	G	.	.	.	F	L	S	E	N	S	K	F	A	E	A	.	.	L	E	A	E	G	V	I	F	V	G	P	P	K	G	A	I	E	A	M	G	D	K	I	T	S	K	K	I	A	Q	E	A	N	V	S	T	V	P	G	Y	M	G	L	I	E	D	A	D	E	A	V	K
Template Known Secondary structure			T			S			B			S	S	.	.	.	S	S	T	T								.	.			T	T	T				S	S	S								T	T	S										T	T	T													S
Template Predicted Secondary structure														.	.	.												.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	D	V	G	F	P	C	I	I	R	P	S	F	T	M	G	G	S	G	G	G	I	A	Y	N	R	E	E	F	E	E	I	C	A	R	G	L	D	L	S	P	T	K	E	L	L	I	D	E	S	L	I	G	W	K	E	Y	E	M	E	V	V	R	D	K	N	D	N	C	I	I	V	C	S	I	E	N	F
Query Conservation
Alig confidence															.	.	.	.	.	.																				.	.	.	.																																		.	.
Template Conservation															.	.	.	.	.	.																				.	.	.	.																																		.	.
Template Sequence		I	S	N	Q	I	G	Y	P	V	M	I	K	A	.	.	.	.	.	.	S	A	M	R	I	A	W	N	D	Q	E	A	R	E	G	F	Q	S	S	.	.	.	.	K	N	D	R	I	F	I	E	K	F	V	T	Q	P	R	H	I	E	I	Q	V	L	C	D	S	H	G	N	G	I	Y	L	G	.	.	E	R	E
Template Known Secondary structure								S	S						.	.	.	.	.	.						B		S												.	.	.	.	T											S	S												T	T	S							.	.
Template Predicted Secondary structure															.	.	.	.	.	.																				.	.	.	.																																		.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	M	G	I	H	T	G	D	S	I	T	V	A	P	A	Q	T	L	T	D	K	E	Y	Q	I	M	R	N	A	S	M	A	V	L	R	E	I	G	V	E	T	G	G	S	N	V	Q	F	A	V	N	P	K	N	G	R	L	I	V	I	E	M	N	P	R	V	S	R	S	S	A	L	A	S	K	A	T	G	F
Query Conservation
Alig confidence																																											.											.
Template Conservation																																											.											.
Template Sequence		C	S	I	Q	R	R	N	Q	K	V	V	E	E	A	P	S	P	F	L	D	E	A	T	R	R	A	M	G	E	Q	A	V	A	L	A	K	A	V	G	Y	A	.	S	A	G	T	V	E	F	I	V	D	.	G	Q	K	N	F	Y	F	L	E	M	N	T	R	L	Q	V	E	H	P	V	T	E	L	I	T	G	V
Template Known Secondary structure							T	T								S		S	S																			T	T	T			.	S										.	T	T	S										S			T	T									T
Template Predicted Secondary structure																																											.											.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.												.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.				.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.											.								.	.	.																			.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.											.								.	.	.																			.
Query Sequence		P	I	A	K	V	A	A	K	L	A	V	G	Y	T	L	D	E	L	M	N	D	I	T	G	G	R	T	P	.	.	.	.	.	.	.	.	.	.	.	A	S	F	E	P	S	I	D	Y	V	.	V	T	K	I	P	R	F	.	.	.	N	F	E	K	F	A	G	A	N	D	R	L	T	T	Q	M	K	S	.	V
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.											.								.	.	.																			.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.											.								.	.	.																			.
Template Conservation
Template Sequence		D	L	V	E	Q	M	I	R	V	A	A	G	E	P	L	S	I	T	Q	G	D	V	K	L	T	G	W	A	I	E	N	R	L	Y	A	E	D	P	Y	R	G	F	L	P	S	I	G	R	L	T	R	Y	R	P	P	A	E	A	A	V	R	N	D	T	G	V	Y	E	G	G	E	I	S	M	Y	Y	D	P	M	I
Template Known Secondary structure											T	T	S				S	S		T	T	T					S									S			G	G	G	T	T								S															S			T	T					T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		G	E	V	M	A	I	G	R	T	Q	Q	E	S	L	Q	K	A	L	R	G	L	E	V	G	A	.	T	G	F	D	P	K	V	S	L	D	D	P	E	A	L	T	K	I	R	R	E	L	K	D	A
Query Conservation																											.
Alig confidence																											.										.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.
Template Sequence		A	K	L	C	T	W	A	P	T	R	A	A	A	I	E	A	M	R	I	A	L	D	S	F	E	V	E	G	I	G	H	N	L	P	F	.	.	.	.	.	.	.	.	L	S	A	V	M	D	H	P
Template Known Secondary structure									S	S																			S	S			S				.	.	.	.	.	.	.	.						T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.									.	.	.	.	.	490	.	.