Job Description P00968 Confidence 100.00% Date Thu Jan 5 10:57:25 GMT 2012 Rank 20 Aligned Residues 361 % Identity 18% Template c3lp8A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine-glycine ligase; PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from2 ehrlichia chaffeensis Resolution 2.15 Å

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		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.			.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		K	I	M	V	L	G	G	G	P	N	R	I	G	Q	G	I	E	F	D	Y	C	C	V	H	A	S	L	A	L	R	E	D	G	.	.	Y	E	T	I	M	V	N	C	N	P	E	T	V	S	T	D	Y	D	T	S	D	R	L	Y	F	E	P	V	T	L	E	D	V	L	E	I	V	R	I	E	K	P	K	G	V
Query Conservation																																			.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.												.	.																	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Sequence		N	V	L	V	I	G	S	G	G	R	E	.	.	.	.	.	.	.	.	.	.	.	H	S	M	L	H	H	I	R	K	S	T	L	L	N	K	L	F	I	A	P	G	R	E	G	M	S	G	L	A	.	.	.	.	D	I	I	D	I	D	I	N	S	T	I	E	V	I	Q	V	C	K	K	E	K	I	E	L	V
Template Known Secondary structure									S				.	.	.	.	.	.	.	.	.	.	.								T	T		T	T											G	G	G	T	T	T	S	.	.	.	.							T	T												T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.												.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	Q	Y	G	G	Q	T	P	L	K	L	A	R	A	L	E	A	A	G	V	P	V	I	G	T	S	P	D	A	I	D	R	A	E	D	R	E	R	F	Q	H	A	V	E	R	L	K	L	K	Q	P	A	N	A	T	V	T	A	I	E	M	A	V	E	K	A	K	E	I	G	Y	P	L	V	V	R	P	S	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	G	P	E	T	P	L	M	N	G	L	S	D	A	L	T	E	E	G	I	L	V	F	G	P	S	K	A	A	A	R	L	E	S	S	K	G	F	T	K	E	L	C	M	R	Y	G	I	P	T	A	K	Y	G	Y	F	V	D	T	N	S	A	Y	K	F	I	D	K	H	K	L	P	L	V	V	K	A	D	G
Template Known Secondary structure					S						T	T								T	T					S																							T			B							S	S											S		S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.					.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.						.	.	.	.
Predicted Secondary structure																															.	.	.	.																																							.	.	.	.	.
Query SS confidence																															.	.	.	.																																							.	.	.	.	.
Query Sequence		V	L	G	G	R	A	M	E	I	V	Y	D	E	A	D	L	R	R	Y	F	Q	T	A	V	S	V	S	N	D	.	.	.	.	A	P	V	L	L	D	H	F	L	D	D	A	V	E	V	D	V	D	A	I	C	D	G	E	M	V	L	I	G	G	I	M	E	H	I	E	Q	A	.	.	.	.	.	G	V	H	S
Query Conservation																															.	.	.	.																																							.	.	.	.	.
Alig confidence																															.	.	.	.											.																												.	.	.	.	.
Template Conservation																																													.
Template Sequence		L	A	Q	G	K	G	T	V	I	C	H	T	H	E	E	A	Y	N	A	V	D	A	M	L	V	H	H	K	F	G	E	A	G	C	A	I	I	I	E	E	F	L	E	.	G	K	E	I	S	F	F	T	L	V	D	G	S	N	P	V	I	L	G	V	A	Q	D	Y	K	T	I	G	D	N	N	K	G	P	N	T
Template Known Secondary structure				T	T	T	S					S	S													T	S		T	T	G	G	G	G	S	S									.	S											S	S																G	G	G
Template Predicted Secondary structure																																													.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.							.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.		.	.	.	.	860	.	.
Predicted Secondary structure																														.	.	.	.	.	.																																							.
Query SS confidence																														.	.	.	.	.	.																																							.
Query Sequence		G	D	S	A	C	S	L	P	A	Y	T	L	S	Q	E	I	Q	D	V	M	R	Q	Q	V	Q	K	L	A	.	.	.	.	.	.	F	E	L	Q	V	R	G	L	M	N	V	Q	F	A	V	K	N	N	E	V	Y	L	I	E	V	N	P	R	A	A	R	T	V	P	F	V	S	K	.	A	T	G	V	P	L	A
Query Conservation																														.	.	.	.	.	.																																							.
Alig confidence																														.	.	.	.	.	.																																							.
Template Conservation
Template Sequence		G	G	M	G	S	Y	S	K	P	N	I	I	T	Q	E	M	E	H	I	I	I	Q	K	I	I	Y	P	T	I	K	A	M	F	N	M	N	I	Q	F	R	G	L	L	F	A	G	I	I	I	K	K	N	E	P	K	L	L	E	Y	N	V	R	F	G	D	P	E	T	Q	S	I	L	P	R	L	N	S	D	F	L
Template Known Secondary structure		S		S						T	T	S	S												T											T	T															T	T									S	S			T	T						G	G	G	B		S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		863	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.																						900	.	.	.	.	.	.	.	.	.	910	.	.	.	.				.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		K	V	A	A	R	V	M	A	G	K	S	L	A	E	Q	G	V	T	K	E	V	I	P	P	Y	Y	S	V	K	E	V	V	L	P	F	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	G	V	D	P	L	L	G	P	E	M	R	S	T	.	.	.	G	E	V	M
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		K	L	L	S	L	T	A	K	G	K	L	G	N	E	S	V	E	L	S	K	K	A	A	L	C	V	V	V	A	S	R	G	Y	P	G	E	Y	K	K	N	S	I	I	N	G	I	E	N	I	E	K	L	P	N	V	Q	L	L	H	A	G	T	R	R	E	G	N	N	W	V	S	D	S	G	R	V	I	N	V	V
Template Known Secondary structure										T			S	S					B		S											T	T	T	T	S	S			S	S				B	S						T		S	S						S	S					T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		919	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	R	T	F	A	E	A	F	A	K	A	Q	L	G	S	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	G	E	N	L	A	S	A	K	H	Q	A	Y	A	A	L	D	L
Template Known Secondary structure					S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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