Phyre 2 alignment of P00968 with c3ic5A

Job Description P00968
Confidence 96.80% Date Thu Jan 5 10:57:25 GMT 2012

Rank 115 Aligned Residues 109

% Identity 19% Template c3ic5A_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative saccharopine dehydrogenase; PDBTitle: n-terminal domain of putative saccharopine dehydrogenase from ruegeria2 pomeroyi.

Resolution 2.08 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.		.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence	S	T	D	R	E	K	I	M	V	L	G	G	G	P	N	R	I	G	Q	G	I	E	F	D	Y	C	C	V	H	A	S	L	A	L	R	E	D	G	.	Y	E	T	I	M	V	N	C	N	P	E	T	V	S	T	D	Y	D	T	S	D	R	L	Y	F	E	P	V	T	L	E	D	V	L	E	I	V	R	I	E	K
Query Conservation																																							.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.															.																																						.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.																																																					.
Template Sequence	N	A	X	R	W	N	I	C	V	V	G	A	G	.	.	.	.	.	.	.	.	.	.	.	K	I	G	Q	X	I	A	A	L	L	K	T	S	S	N	Y	S	V	T	V	A	D	H	D	L	A	A	L	A	V	L	N	R	X	G	V	A	T	K	Q	V	D	A	K	D	E	A	G	L	A	K	A	.	L	G	G
Template Known Secondary structure		T	T										S	.	.	.	.	.	.	.	.	.	.	.														S	S								S										T	T	T								T	T									.	T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																																																					.
Template SS confidence

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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