Job Description P00968 Confidence 97.15% Date Thu Jan 5 10:57:25 GMT 2012 Rank 110 Aligned Residues 131 % Identity 14% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	K	I	M	V	L	G	G	G	P	N	R	I	G	Q	G	I	E	F	D	Y	C	C	V	H	A	S	L	A	L	R	E	D	G	Y	E	T	I	M	V	N	C	N	P	E	T	V	S	T	D	Y	D	T	S	D	R	L	Y	F	E	P	V	T	L	E	D	V	L	E	I	V	R	I	E	K	P	K	G	V
Query Conservation
Alig confidence												.	.							.	.	.	.	.	.	.	.	.
Template Conservation												.	.							.	.	.	.	.	.	.	.	.
Template Sequence		C	N	H	A	L	L	V	G	Y	G	.	.	R	V	G	S	L	L	.	.	.	.	.	.	.	.	.	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L
Template Known Secondary structure			S								S	.	.							.	.	.	.	.	.	.	.	.							T	T								S											T	T						S		T	T	S							T	T	G	G	G		S
Template Predicted Secondary structure												.	.							.	.	.	.	.	.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.			.	.	.	430	.	.										.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		639	640	.	.	.	.	.	.	.	.		.	650	.	.	.	.	.	.	.	.			.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.
Predicted Secondary structure												.											.	.
Query SS confidence												.											.	.
Query Sequence		I	V	Q	Y	G	G	Q	T	P	L	.	K	L	A	R	A	L	E	A	A	G	.	.	V	P	V	I	G	T	S	P	D	A	I	D	R	A	E	D	R	E	R	F	Q	H	A	V	E	R	L	K	L	K	Q	P	A	N	A	T	V	T	A	I	E	M	A	V	E	K	A	K	E	I	G	Y	P
Query Conservation												.											.	.
Alig confidence												.											.	.						.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																														.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	.	.	.	.	.	.	.	.	R	A	H	Y	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V	.	.	.	V	X	G	E	R	E	I	A	R	T	X	L	E	L	L	E	T	P
Template Known Secondary structure						S																	S	S	S					.	.	.	.	.	.	.	.			S	S										T	T		S			.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.									.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.				.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions