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Job DescriptionP00968
Confidence96.86%DateThu Jan 5 10:57:25 GMT 2012
Rank114Aligned Residues210
% Identity17%Templatec2ywcC_
PDB info PDB header:ligaseChain: C: PDB Molecule:gmp synthase [glutamine-hydrolyzing]; PDBTitle: crystal structure of gmp synthetase from thermus thermophilus in2 complex with xmp
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10......... 20........ .30.........40.........50.........60........
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Query Sequence  KSILILGAGPIV. . . . . . . IGQACEFDY. . . . . . . . . . . . SGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEP
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Template Sequence  DRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDAKERFLKALKGVEDPEEKRK
Template Known Secondary structure  S


SSTT


S
S
TTTT


TT


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   210.........220.........230.........240.........250.........260.........270.........280.........
 
   6970.........80.........90......... 100.........110.........120......
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Query Sequence  IHWEVVRKIIEKERPDAVLPTMGGQTALNCA. . . . . . . . . . LELERQGVLEEFGVTMIGATADAIDKA. . . . . . . . . . . .
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Template Sequence  IIGREFVAAFSQVARERGPFRFLAQGTLYPDVIEFELLEPFRLLFKDEVRELA. . LLLGLPDTLRLRHPFPGPGLAVRVL
Template Known Secondary structure  S


S







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T




TTGGGGGBS
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   290.........300.........310.........320.........330.........340.. .......350.........360.......
 
   127..130.........140.........150.........160.........170.........180.........190...... ...
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Query Sequence  . . . . . EDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGL. . DLS
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Template Sequence  GEVTEERLEILRRADDIFTSLLREWGLYEKVAQALAVLTPVGYVLALRAVTTEDFXTADWARLPLEFLDEAARRITRRVP
Template Known Secondary structure  S


TT
GGGSS


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T
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   392.......400.........410.........420.........430.........440.........450.........460.........470.
 
   200.........210.........
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Query Sequence  PTKELLIDESLIGWKEYEME
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Template Sequence  EIGRVVYDLTSKPPATIEWE
Template Known Secondary structure  T



BTTS
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   484.....490.........500...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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