Job Description P00968 Confidence 100.00% Date Thu Jan 5 10:57:25 GMT 2012 Rank 7 Aligned Residues 397 % Identity 22% Template c2vpqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:acetyl-coa carboxylase; PDBTitle: crystal structure of biotin carboxylase from s. aureus2 complexed with amppnp Resolution 2.1 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.									.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.
Query Sequence		K	S	I	L	I	L	G	A	G	P	I	V	I	G	Q	A	C	E	F	D	Y	S	G	A	Q	A	C	K	A	L	R	E	E	G	Y	R	V	I	L	V	N	S	N	P	A	T	I	M	T	D	P	E	M	A	D	A	T	Y	I	E	P	.	.	.	.	.	.	.	.	I	H	W	E	V	V	R	K	I	I	E
Query Conservation																																																															.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	V	L	I	A	N	R	G	E	I	A	V	.	.	.	.	.	.	.	.	.	.	.	R	I	I	R	A	C	R	D	L	G	I	Q	T	V	A	I	Y	S	E	G	D	K	D	A	L	H	T	Q	I	A	D	E	A	Y	C	V	G	P	T	L	S	K	D	S	Y	L	N	I	P	N	I	L	S	I	A	T
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	.									T	T									G	G	G	T	T							S	S								S	S	G	G	G	T	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.												.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		K	E	R	P	D	A	V	L	P	T	M	G	G	Q	T	A	L	N	C	A	L	E	L	E	R	Q	G	V	L	E	E	F	G	V	T	M	I	G	A	T	A	D	A	I	D	K	A	E	D	R	R	R	F	D	V	A	M	K	K	I	G	L	E	T	A	R	S	G	.	.	I	A	H	T	M	E	E	A	L	A
Query Conservation																																																																						.	.
Alig confidence														.	.	.												.	.																																									.	.
Template Conservation														.	.	.												.	.
Template Sequence		S	T	G	C	D	G	V	H	P	G	Y	G	.	.	.	F	L	A	E	N	A	D	F	A	E	L	.	.	C	E	A	C	Q	L	K	F	I	G	P	S	Y	Q	S	I	Q	K	M	G	I	K	D	V	A	K	A	E	M	I	K	A	N	V	P	V	V	P	G	S	D	G	L	M	K	D	V	S	E	A	K	K
Template Known Secondary structure			T	T		S						S	S	.	.	.	T	T	T	T								.	.			T	T	T				S	S	S										S											T	T			B		S	B		S	S		B	S
Template Predicted Secondary structure														.	.	.												.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		V	A	A	D	V	G	F	P	C	I	I	R	P	S	F	T	M	G	G	S	G	G	G	I	A	Y	N	R	E	E	F	E	E	I	C	A	R	G	L	D	L	.	.	.	.	S	P	T	K	E	L	L	I	D	E	S	L	I	G	W	K	E	Y	E	M	E	V	V	R	D	K	N	D	N	C	I	I	V	C	S
Query Conservation																																											.	.	.	.
Alig confidence																																											.	.	.	.
Template Conservation
Template Sequence		I	A	K	K	I	G	Y	P	V	I	I	K	A	T	A	G	G	G	G	K	G	I	R	V	A	R	D	E	K	E	L	E	T	G	F	R	M	T	E	Q	E	A	Q	T	A	F	G	N	G	G	L	Y	M	E	K	F	I	E	N	F	R	H	I	E	I	Q	I	V	G	D	S	Y	G	N	V	I	H	L	G	E
Template Known Secondary structure								S	S						T	T			T	T		S					S	S																				S												S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	N	F	D	A	M	G	I	H	T	G	D	S	I	T	V	A	P	A	Q	T	L	T	D	K	E	Y	Q	I	M	R	N	A	S	M	A	V	L	R	E	I	G	V	E	T	G	G	S	N	V	Q	F	A	V	N	P	K	N	G	R	L	I	V	I	E	M	N	P	R	V	S	R	S	S	A	L	A	S	K
Query Conservation
Alig confidence		.	.																																												.
Template Conservation		.	.																																												.
Template Sequence		.	.	R	D	C	T	I	Q	R	R	M	Q	K	L	V	E	E	A	P	S	P	I	L	D	D	E	T	R	R	E	M	G	N	A	A	V	R	A	A	K	A	V	N	Y	E	.	N	A	G	T	I	E	F	I	Y	D	L	N	D	N	K	F	Y	F	M	E	M	N	T	R	I	Q	V	E	H	P	V	T	E	M
Template Known Secondary structure		.	.								T	T								S		T	T																				T	T			.											T	T	T	T										S			T	T
Template Predicted Secondary structure		.	.																																												.
Template SS confidence
				226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.												.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.				.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.											.									.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.											.									.	.	.
Query Sequence		A	T	G	F	P	I	A	K	V	A	A	K	L	A	V	G	Y	T	L	D	E	L	M	N	D	I	T	G	G	R	T	P	.	.	.	.	.	.	.	.	.	.	.	A	S	F	E	P	S	I	D	Y	V	.	V	T	K	I	P	R	F	N	.	.	.	F	E	K	F	A	G	A	N	D	R	L	T	T	Q	M
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.											.									.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.											.									.	.	.
Template Conservation
Template Sequence		V	T	G	I	D	L	V	K	L	Q	L	Q	V	A	M	G	D	V	L	P	Y	K	Q	E	D	I	K	L	T	G	H	A	I	E	F	R	I	N	A	E	N	P	Y	K	N	F	M	P	S	P	G	K	I	E	Q	Y	L	A	P	G	G	Y	G	V	R	I	E	S	A	C	Y	T	N	Y	T	I	P	P	Y	Y
Template Known Secondary structure																T	T				S			G	G	G					S									S			G	G	G	T	T					S	B		S							S	T	T									T	T		B			T	T	T
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		379	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure					.																							.
Query SS confidence					.																							.
Query Sequence		K	S	V	.	G	E	V	M	A	I	G	R	T	Q	Q	E	S	L	Q	K	A	L	R	G	L	E	.	V	G	A	T	G	F	D	P	K	V	S	L	D	D	P	E	A	L	T	K	I	R	R	E	L	K	D	A
Query Conservation					.																							.
Alig confidence					.																							.													.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.
Template Sequence		D	S	M	V	A	K	L	I	I	H	E	P	T	R	D	E	A	I	M	A	G	I	R	A	L	S	E	F	V	V	L	G	I	D	T	T	I	P	F	.	.	.	.	.	.	.	.	H	I	K	L	L	N	N	D
Template Known Secondary structure													S	S														T					S	S			S				.	.	.	.	.	.	.	.						T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.									.	.	.	.	.	.	.	.