Job Description P00968 Confidence 100.00% Date Thu Jan 5 10:57:25 GMT 2012 Rank 32 Aligned Residues 297 % Identity 18% Template c2r85B_ PDB info PDB header:unknown function Chain: B: PDB Molecule:purp protein pf1517; PDBTitle: crystal structure of purp from pyrococcus furiosus complexed with amp Resolution 1.70 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		I	V	I	G	Q	A	C	E	F	D	Y	S	G	A	Q	A	C	K	A	L	R	E	E	G	Y	R	V	I	L	V	.	.	N	S	N	P	A	T	I	M	T	D	P	E	M	A	D	A	T	Y	I	E	P	I	H	W	E	V	V	R	K	I	I	E	K	E	R	P	D	A	V	L	P	T	M	G	G	Q	T	A
Query Conservation																																.	.
Alig confidence																																.	.																															.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.
Template Sequence		M	K	V	R	I	A	T	Y	A	S	H	S	A	L	Q	I	L	K	G	A	K	D	E	G	F	E	T	I	A	F	G	S	S	K	V	K	P	L	Y	T	K	Y	F	P	V	A	D	Y	F	I	E	E	K	Y	P	E	E	E	L	L	N	L	.	.	.	.	.	.	N	A	V	V	V	P	T	G	S	F	V	A
Template Known Secondary structure										S	S	T	T											T	T							S		G	G	G						T	T	S				S					S	S									T	.	.	.	.	.	.	T							T	T
Template Predicted Secondary structure																																																																.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	C	A	L	E	L	E	R	Q	G	V	L	E	E	F	G	V	T	M	I	G	A	T	A	D	A	I	D	K	A	E	D	R	R	R	F	D	V	A	M	K	K	I	G	L	E	T	A	R	S	G	I	A	H	T	M	E	E	A	L	A	V	A	A	D	V	G	F	P	C	I	I	R	P	S	F	T	M	G
Query Conservation
Alig confidence								.	.	.	.	.	.													.																												.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation								.	.	.	.	.	.													.																												.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		H	L	G	I	E	L	.	.	.	.	.	.	V	E	N	M	K	V	P	Y	F	G	N	K	.	R	V	L	R	W	E	S	D	R	N	L	E	R	K	W	L	K	K	A	G	I	R	V	P	E	V	Y	.	.	.	.	.	.	.	.	.	E	D	P	D	D	I	E	K	P	V	I	V	K	P	.	.	.	.	.
Template Known Secondary structure								.	.	.	.	.	.			T		S	S		B	B	S		T	.	T							S											T	T						B		.	.	.	.	.	.	.	.	.	S	S	G	G	G			S							.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.													.																												.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.										120	.	.	.	.	.	.	.	.	.	130	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	G	G	G	I	A	Y	N	R	E	E	F	E	E	I	C	A	R	G	L	D	.	.	.	L	S	P	T	K	E	L	L	I	D	E	S	L	I	G	W	K	E	Y	E	M	E	V	V	R	D	K	N	D	N	C	I	I	V	C	S	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	G	Y	F	L	A	K	D	P	E	D	F	W	R	K	A	E	K	F	L	G	I	K	R	K	E	D	L	K	N	I	Q	I	Q	E	Y	V	L	G	V	P	V	Y	P	H	Y	F	Y	S	K	V	R	E	E	L	E	L	M	S	I	D	R	R	Y	E	S	N	V	D	A	I	G	R	I	P	A	K	D	Q
Template Known Secondary structure			T	T					S	S												T				S	S	T	T		S	S																				T	T	T	T															G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
					236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	N	F	D	A	M	G	I	H	T	G	D	S	I	T	V	A	P	A	Q	T	L	T	D	K	E	Y	Q	I	M	R	N	A	S	M	A	V	L	R	E	I	G	V	E	T	G	G	S	N	V	Q	F	A	V	N	P	K	N	G	R	L	I	V	I	E	M	N	P	R	V	S	R	S	S	A	L	A	S
Query Conservation		.	.	.
Alig confidence		.	.	.																		.																																					.
Template Conservation																						.																																					.
Template Sequence		L	E	F	D	M	D	I	T	Y	T	V	I	G	N	I	P	I	V	L	R	.	E	S	L	L	M	D	V	I	E	A	G	E	R	V	V	K	A	A	E	E	L	M	G	G	L	W	G	P	F	C	L	E	G	V	F	T	.	P	D	L	E	F	V	V	F	E	I	S	A	R	I	V	A	G	T	N	I	F	V
Template Known Secondary structure			T	S																		.	G	G	G																			S	S														.	T	T	S										S			G	G	G	G	G	G	T
Template Predicted Secondary structure																						.																																					.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		K	A	T	G	F	P	I	A	K	V	A	A	K	L	A	V	G	Y	T	L	D	.	E	L	M	N	D	I	T	G	G	R
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		N	G	S	P	Y	T	W	L	R	Y	D	R	P	V	S	T	G	R	R	I	A	M	E	I	R	E	A	I	E	N	D	M
Template Known Secondary structure		T			T	T	G	G	G	T		S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions