 |
Job Description | P00968 | Confidence | 91.29% | Date | Thu Jan 5 10:57:25 GMT 2012 |
Rank | 369 | Aligned Residues | 122 |
% Identity | 20% | Template | c2qx7A_ |
PDB info |
PDB header:plant protein | Chain: A: PDB Molecule:eugenol synthase 1; |
PDBTitle: structure of eugenol synthase from ocimum basilicum
|
Resolution | 1.75 Å |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  | . | . | . | . | . |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | S | I | L | I | L | G | A | G | P | I | V | I | G | Q | A | C | E | F | D | Y | S | G | A | Q | A | C | K | A | L | R | E | E | G | Y | R | V | I | L | V | N | S | N | P | A | T | I | M | T | D | P | E | M | . |
. |
. |
. |
. |
A | D | A | T | Y | I | E | P | I | H | W | E | V | V | R | K | I | I | E | K | E | R |
Query Conservation |   |
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|   |
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|   |   |
|
|   |
|
|   |
|   |   |   |   | . | . | . | . | . |
|
|   |   |
|
|   |
|
|   |   |
|   |
|   |   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   | . | . |   |
Template Sequence |   |
S | K | I | L | I | F | G | G | T | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | I | G | N | H | M | V | K | G | S | L | K | L | G | H | P | T | Y | V | F | T | R | P | N | S | S | K | T | T | L | L | D | E | F | Q | S | L | G | A | I | I | V | K | G | E | L | D | E | H | E | K | L | V | E | L | M | K | . |
. |
K |
Template Known Secondary structure |   |
|
|  |  |  |  | T | T | T | S | . | . | . | . | . | . | . | . | . | . | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
| S | S |
| S |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  | T | . | . | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
. |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | A | V | L | P | T | M | G | G | Q | T | A | L | N | C | A | L | E | L | E | R | Q | G | V | L | E | E | F | G | V | T | M | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | A | T | A | D | A | I | D | K | A | E | D | R | R | R | F | D | V | A | M | K | K | I | G | L | E | T |
Query Conservation |   |
|
|
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|
|   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
| . | . |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | D | V | V | I | S | A | L | A | F | P | Q | I | L | D | Q | F | K | I | L | E | A | I | . |
. |
K | V | A | G | N | I | K | R | F | L | P | S | D | F | G | V | E | E | D | R | I | N | A | L | P | P | F | E | A | L | I | E | R | K | R | M | I | R | R | A | I | E | E | A | N | I | P | Y |
Template Known Secondary structure |   |
| S |  |  |  |  |
|
|
| G | G | G | S | T | T |  |  |  |  |  |  |  |  | . | . |  |  |  |
|
|
| S |  |  |  |
| S |
|
| S | S |
| T | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| B |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|