Job Description P00968 Confidence 100.00% Date Thu Jan 5 10:57:25 GMT 2012 Rank 18 Aligned Residues 359 % Identity 16% Template c2qk4A_ PDB info PDB header:ligase Chain: A: PDB Molecule:trifunctional purine biosynthetic protein adenosine-3; PDBTitle: human glycinamide ribonucleotide synthetase Resolution 2.45 Å

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		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.			.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		T	D	R	E	K	I	M	V	L	G	G	G	P	N	R	I	G	Q	G	I	E	F	D	Y	C	C	V	H	A	S	L	A	L	R	E	.	.	D	G	Y	E	T	I	M	V	N	C	N	P	E	T	V	S	T	D	Y	D	T	S	D	R	L	Y	F	E	P	V	T	L	E	D	V	L	E	I	V	R	I	E	K
Query Conservation																																					.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.													.	.																					.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Sequence		S	M	A	A	R	V	L	I	I	G	S	G	.	.	.	.	.	.	.	.	.	.	.	G	R	E	H	T	L	A	W	K	L	A	Q	S	H	H	V	K	Q	V	L	V	A	P	G	N	A	G	T	A	C	S	E	K	I	.	.	S	N	T	A	I	S	I	S	D	H	T	A	L	A	Q	F	C	K	E	K	K
Template Known Secondary structure				S									S	.	.	.	.	.	.	.	.	.	.	.											T	T		T	T											G	G	G	S	B	S	S	S		.	.							S	S													T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.												.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	G	V	I	V	Q	Y	G	G	Q	T	P	L	K	L	A	R	A	L	E	A	A	G	V	P	V	I	G	T	S	P	D	A	I	D	R	A	E	D	R	E	R	F	Q	H	A	V	E	R	L	K	L	K	Q	P	A	N	A	T	V	T	A	I	E	M	A	V	E	K	A	K	E	I	G	Y	P	L	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	F	V	V	V	G	P	E	A	P	L	A	A	G	I	V	G	N	L	R	S	A	G	V	Q	C	F	G	P	T	A	E	A	A	Q	L	E	S	S	K	R	F	A	K	E	F	M	D	R	H	G	I	P	T	A	Q	W	K	A	F	T	K	P	E	E	A	C	S	F	I	L	S	A	D	F	P	A	L	V
Template Known Secondary structure									S	S					T	T								T	T					S			T	T	T	T					B											T	T			B							S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		715	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.						.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		R	P	S	Y	V	L	G	G	R	A	M	E	I	V	Y	D	E	A	D	L	R	R	Y	F	Q	T	A	V	S	V	S	N	D	A	P	V	L	L	D	H	F	L	D	D	A	V	E	V	D	V	D	A	I	C	D	G	E	M	V	L	I	G	G	I	M	E	H	I	E	.	.	.	.	.	Q	A	G	V	H	S
Query Conservation																																																																							.	.	.	.	.
Alig confidence						.	.																				.	.	.																.																										.	.	.	.	.
Template Conservation						.	.																				.	.	.																.
Template Sequence		V	K	A	S	.	.	G	L	K	G	V	I	V	A	K	S	K	E	E	A	C	K	A	V	Q	.	.	.	E	I	M	Q	E	E	T	I	V	I	E	E	L	L	D	.	G	E	E	V	S	C	L	C	F	T	D	G	K	T	V	A	P	M	P	P	A	Q	D	H	K	R	L	L	E	G	D	G	G	P	N	T
Template Known Secondary structure					S	.	.	B								S	S										.	.	.			T	T												.	S											S	S								B								T	T	T
Template Predicted Secondary structure						.	.																				.	.	.																.
Template SS confidence
		147	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.							820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.		.	.	.	.	.	.	.	.	860	.	.
Predicted Secondary structure																																.	.	.	.	.	.																																	.
Query SS confidence																																.	.	.	.	.	.																																	.
Query Sequence		G	D	S	A	C	S	L	P	A	Y	T	L	S	Q	E	I	Q	D	V	M	R	Q	Q	V	Q	K	L	A	F	E	.	.	.	.	.	.	L	Q	V	R	G	L	M	N	V	Q	F	A	V	K	N	N	E	V	Y	L	I	E	V	N	P	R	A	A	R	T	V	P	.	F	V	S	K	A	T	G	V	P	L	A
Query Conservation																																.	.	.	.	.	.																																	.
Alig confidence																																.	.	.	.	.	.																																	.
Template Conservation
Template Sequence		G	G	M	G	A	Y	C	P	A	P	Q	V	S	N	D	L	L	L	K	I	K	D	T	V	L	Q	R	T	V	D	G	M	Q	Q	E	G	T	P	Y	T	G	I	L	Y	A	G	I	M	L	T	K	N	G	P	K	V	L	E	F	N	C	R	F	G	D	P	E	C	Q	V	I	L	P	L	L	K	S	D	L	Y
Template Known Secondary structure									S		T	T													T											T	T															T	T									S	S			T	T	T					G	G	G	B		S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		863	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.													.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.									.	.	910	.	.	.	.	.					.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.									.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.									.	.	.	.
Query Sequence		K	V	A	A	R	V	M	A	G	K	S	L	A	E	Q	G	V	T	K	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	P	P	Y	Y	S	V	K	E	V	V	L	P	F	N	K	F	P	G	V	D	P	L	L	.	.	.	.	.	.	.	.	G	P	E	M	R	S	T	G	.	.	.	.	E	V	M
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.									.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		E	V	I	Q	S	T	L	D	G	L	L	C	T	S	L	P	V	W	L	E	N	H	T	A	L	T	V	V	M	A	S	K	G	Y	P	G	D	Y	T	K	G	V	E	I	T	G	F	P	E	A	Q	A	L	G	L	E	V	F	H	A	G	T	A	L	K	N	G	K	V	V	T	H	G	G	R	V	L	A	V	T
Template Known Secondary structure									T	T		G	G	G	G				B		T	T											T	T	T	T	S	S				S		B		B								T	T						S	S					T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		919	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	R	T	F	A	E	A	F	A	K	A	Q	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	R	E	N	L	I	S	A	L	E	E	A	K	K	G
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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