Job Description P00968 Confidence 98.88% Date Thu Jan 5 10:57:25 GMT 2012 Rank 94 Aligned Residues 227 % Identity 17% Template c2pbzC_ PDB info PDB header:ligase Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of an imp biosynthesis protein purp from2 thermococcus kodakaraensis Resolution 2.50 Å

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		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.		.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		C	C	V	H	A	S	L	A	L	R	E	D	G	Y	E	T	I	M	V	N	C	.	N	P	E	T	V	S	T	D	Y	D	T	S	D	R	L	Y	F	E	P	V	T	L	E	D	V	L	E	I	V	R	I	E	K	P	K	G	V	I	V	Q	Y	G	G	Q	T	P	L	K	L	A	R	A	L	E	A	A	G	V
Query Conservation																							.
Alig confidence																							.																				.								.	.	.	.	.	.
Template Conservation																																											.								.	.	.	.	.	.
Template Sequence		S	S	L	Q	I	L	L	G	A	K	K	E	G	F	K	T	R	L	Y	V	S	P	K	R	R	P	F	Y	S	S	L	P	I	V	D	D	L	V	V	A	E	.	E	X	T	S	I	L	N	.	.	.	.	.	.	D	D	G	I	V	V	P	H	G	S	F	V	A	Y	L	G	I	E	A	I	E	K	A	K	A
Template Known Secondary structure		T											T	T									T	T	T						T		T	T		S						S	.		S			T	T		.	.	.	.	.	.		S	S	B				B	T	T					S							T			S
Template Predicted Secondary structure																																											.								.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	I	G	T	S	P	D	A	I	D	R	A	E	D	R	E	R	F	Q	H	A	V	E	R	L	K	L	K	Q	P	A	N	A	T	V	T	A	I	E	M	A	V	E	K	A	K	E	I	G	Y	P	L	V	V	R	P	S	Y	V	L	G	G	R	A	M	E	I	V	Y	D	E	A	D	L	R	R	Y	F	Q
Query Conservation
Alig confidence						.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation						.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Sequence		R	F	F	G	.	N	R	R	F	L	K	W	E	T	T	F	E	L	Q	D	K	A	L	E	G	A	G	I	P	R	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	E	P	E	D	A	K	P	D	E	L	Y	F	V	R	I	E	G	S	E	L	.	.	.	.	.
Template Known Secondary structure				B	S	.		S	S	G	G	G	G	G	S												T	T			B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B			S					S	S													.	.	.	.	.
Template Predicted Secondary structure						.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		85	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																						.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.			770	.	.	.	.	.	.	.	.	.	780	.	.	.	.									.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																.	.	.	.	.	.	.	.
Query SS confidence																																.	.																.	.	.	.	.	.	.	.
Query Sequence		T	A	V	S	V	S	N	D	A	P	V	L	L	D	H	F	L	D	D	A	V	E	V	D	V	D	A	I	C	D	.	.	G	E	M	V	L	I	G	G	I	M	E	H	I	E	Q	.	.	.	.	.	.	.	.	A	G	V	H	S	G	D	S	A	C	S	L	P	A	Y	T	L	S	Q	E	I	Q	D	V	M
Query Conservation																																.	.																.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.															.												.	.																.	.	.	.	.	.	.	.																.
Template Conservation		.	.	.	.															.																																																				.
Template Sequence		.	.	.	.	E	E	R	L	S	P	Y	R	V	E	R	F	I	P	.	G	V	Y	L	Y	V	H	F	F	Y	S	P	I	L	E	R	L	E	L	L	G	V	D	E	R	V	L	I	A	D	G	N	A	R	W	P	V	K	P	L	P	Y	T	I	V	G	N	R	A	I	A	.	L	R	E	S	L	L	P	Q	L
Template Known Secondary structure		.	.	.	.	S														.	S											T	T	T	T													T	T		S	S	S	S	S			S														.			G	G	G
Template Predicted Secondary structure		.	.	.	.															.																																																				.
Template SS confidence
						150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.
		810	.	.	.	.	.	.	.	.	.	820							.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		R	Q	Q	V	Q	K	L	A	F	E	L	.	.	.	.	.	.	Q	V	R	G	L	M	N	V	Q	F	A	V	K	N	N	E	V	Y	L	I	E	V	N	P	R	A	A	R
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.													.
Template Conservation																															.
Template Sequence		Y	D	Y	G	L	A	F	V	R	T	X	R	E	L	E	P	P	G	V	I	G	P	F	A	L	H	F	A	Y	.	D	G	S	F	K	A	I	G	I	A	S	R	I	D	G
Template Known Secondary structure																S	T	T				S									.	S	S	S								S	S	B		S
Template Predicted Secondary structure																															.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions