Job Description P00968 Confidence 99.88% Date Thu Jan 5 10:57:25 GMT 2012 Rank 70 Aligned Residues 212 % Identity 14% Template c2p0aA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:synapsin-3; PDBTitle: the crystal structure of human synapsin iii (syn3) in complex with2 amppnp Resolution 1.90 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		R	P	D	A	V	L	P	T	M	G	G	Q	T	A	L	N	C	A	L	E	L	E	R	Q	G	V	L	E	E	F	G	V	T	M	I	G	A	T	A	D	A	I	D	K	A	E	D	R	R	R	F	D	V	A	M	K	K	I	G	L	E	T	A	R	S	G	I	A	H	T	M	.	.	.	.	E	E	A	L	A
Query Conservation																																																																									.	.	.	.
Alig confidence																																							.																																		.	.	.	.
Template Conservation																																							.
Template Sequence		K	P	D	F	I	L	V	R	Q	H	A	Y	S	M	A	L	G	E	D	Y	R	S	L	V	I	G	L	Q	Y	G	G	L	P	A	V	N	S	.	L	Y	S	V	Y	N	F	C	S	K	P	W	V	F	S	Q	L	I	K	I	F	H	S	L	G	P	E	K	F	P	L	V	E	Q	T	F	F	P	N	H	K	P
Template Known Secondary structure				S						S		S			G	G	G	T													T	T					S		.							T	T																		T	T	T	S		B							S	S	S	T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	D	V	G	F	P	C	I	I	R	P	S	F	T	M	G	G	S	G	G	G	I	A	Y	N	R	E	E	F	E	E	I	C	A	R	G	L	D	L	S	P	T	K	E	L	L	I	D	E	S	L	I	G	W	K	E	Y	E	M	E	V	V	R	D	K	N	D	N	C	I	I	V	C	S	I	E	N	F
Query Conservation
Alig confidence																																												.	.
Template Conservation																																												.	.
Template Sequence		M	V	T	A	P	H	F	P	V	V	V	K	L	G	H	A	H	A	G	M	G	K	I	K	V	E	N	Q	L	D	F	Q	D	I	T	S	V	V	A	M	A	K	.	.	T	Y	A	T	T	E	A	F	I	D	S	K	Y	D	I	R	I	Q	K	I	G	S	N	Y	K	A	Y	M	R	T	S	I	S	G	N	W
Template Known Secondary structure						S	S	S	S						S	S			T	T	T	T						S															T	.	.																					T	T										S	S	S		S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.					.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		D	A	M	G	I	H	T	G	D	S	I	T	V	A	P	A	Q	T	L	T	D	K	E	Y	Q	I	M	R	N	A	S	M	A	V	L	R	E	I	G	V	E	T	G	G	S	N	V	Q	F	A	V	N	P	K	N	G	R	L	I	V	I	E	M	N	.	.	.	.	P	R	V	S	R	S
Query Conservation																																																																		.	.	.	.
Alig confidence					.													.	.	.	.	.	.	.	.																		.											.												.	.	.	.
Template Conservation					.													.	.	.	.	.	.	.	.																		.											.
Template Sequence		K	A	N	.	T	G	S	A	M	L	E	Q	V	A	M	T	.	.	.	.	.	.	.	.	E	R	Y	R	L	W	V	D	S	C	S	E	M	F	G	G	L	.	D	I	C	A	V	K	A	V	H	S	.	K	D	G	R	D	Y	I	I	E	V	M	D	S	S	M	P	L	I	G	E	H
Template Known Secondary structure		S	T	T	.	S	S	S										.	.	.	.	.	.	.	.											T	T	G	G	G			.	S										.	T	T	S										T	T					G	G	G
Template Predicted Secondary structure					.													.	.	.	.	.	.	.	.																		.											.
Template SS confidence
		315	.	.		.	.	320	.	.	.	.	.	.	.	.	.									330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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