Job Description P00968 Confidence 92.64% Date Thu Jan 5 10:57:25 GMT 2012 Rank 281 Aligned Residues 97 % Identity 19% Template c2g5cD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from aquifex aeolicus Resolution 1.90 Å

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		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.			.	.	.	.	.	600	.	.	.	.	.														.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence																																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		R	E	K	I	M	V	L	G	G	G	P	N	R	I	G	Q	G	I	E	F	D	Y	C	C	V	H	A	S	L	A	L	R	E	D	G	Y	.	.	E	T	I	M	V	N	C	N	P	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	T	D	Y	D	T	S	D	R	L	Y	F	.	.	.	.	.
Query Conservation																																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence												.	.							.	.	.	.	.	.	.	.	.										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation												.	.							.	.	.	.	.	.	.	.	.
Template Sequence		X	Q	N	V	L	I	V	G	V	G	.	.	F	X	G	G	S	F	.	.	.	.	.	.	.	.	.	A	K	S	L	R	R	S	G	F	K	G	K	I	Y	G	Y	D	I	N	P	E	S	I	S	K	A	V	D	L	G	I	I	D	E	G	T	T	S	I	A	K	V	E	D	F	S	P	D	F	V	X	L	S
Template Known Secondary structure									S		S	.	.							.	.	.	.	.	.	.	.	.							T	T			S							S											T	T	S		S				S		G	G	G	G	G	G	G			S
Template Predicted Secondary structure												.	.							.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
				619	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	E	P	V	T	L	E	D	V	L	E	I	V	R	I	E	K	P	K	G	V	I	V	Q	Y	G	G	Q	T	P	L	K	L	A	R	A	L	E	A	A	G	V	P	V	I	G	T	S	P
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		S	P	V	R	T	F	R	E	I	A	K	K	L	S	Y	I	L	S	E	D	A	T	V	T	D	Q	G	S	V	K	G	K	L	V	Y	D	L	E	N	I	L	G	K	R	F	V	G	G	H	P
Template Known Secondary structure		S		G	G	G												S		T	T								S			T											G	G	G
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions