Job Description P00968 Confidence 96.80% Date Thu Jan 5 10:57:25 GMT 2012 Rank 116 Aligned Residues 119 % Identity 18% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		P	K	R	T	D	I	K	S	I	L	I	L	G	A	G	P	I	V	I	G	Q	A	C	E	F	D	Y	S	G	A	Q	A	C	.	K	A	L	R	E	E	G	Y	R	V	I	L	V	N	S	N	P	A	T	I	M	T	D	P	E	M	A	D	A	T	Y	I	E	P	I	H	W	E	V	V	R	K	I	I	E	K
Query Conservation																																			.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.								.																																									.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Template Sequence		P	E	X	R	R	V	R	H	I	H	F	V	G	I	G	.	.	.	.	.	.	.	.	.	.	.	G	A	G	X	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	N	P	V	T	Q	Q	L	X	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	V	.	.	.	.	.	.
Template Known Secondary structure					T	T								T	T	T	.	.	.	.	.	.	.	.	.	.	.	S	T	T											T	T								S	S											T	T					S	S			G	G	G	G	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.												.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	P	D	A	V	L	P	T	M	G	G	Q	T	A	L	N	C	A	L	E	L	E	R	Q	G	V	L	E	E	F	G	V	T	M	I	G	A	T	A	D	A	I	D	K	A	E	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	F	D	V	A	M	K	K	I	G	L	E	T
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.											.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.											.	.
Template Sequence		R	D	A	S	V	V	V	V	S	S	A	.	.	.	.	I	S	A	D	N	P	E	I	V	A	.	.	A	H	E	A	R	I	P	V	I	R	R	A	E	X	L	A	E	L	X	R	F	R	H	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	X	V	S	S	I	Y	A	E	A	G	L	D	P
Template Known Secondary structure		T	T		S						T	T	.	.	.	.			T	T							.	.				T	T															T	T	S							S	S	S																T	T
Template Predicted Secondary structure													.	.	.	.											.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions