 |
Job Description | P00968 | Confidence | 89.84% | Date | Thu Jan 5 10:57:25 GMT 2012 |
Rank | 456 | Aligned Residues | 54 |
% Identity | 22% | Template | c2eklA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; |
PDBTitle: structure of st1218 protein from sulfolobus tokodaii
|
Resolution | 1.77 Å |
|
 |
  |   |
559 | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | K | I | M | V | L | G | G | G | P | N | R | I | G | Q | G | I | E | F | D | Y | C | C | V | H | A | S | L | A | L | R | E | D | G | Y | E | T | I | M | V | N | C | N | P | E | T | V | S | T | D | Y | D | T | S | D | R | L | Y | F | E | P | V | T | L | E | D | V | L | E |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |
|
|
|
|   |   |
|   |   |
|   |
|
|
|   |   |
|   |   |
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|   |
| . | . |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . |
|   |   |
|   |
|
|
|   |   |
|   |   |   |
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
G | K | T | I | G | I | V | G | F | G | . |
. |
R | I | G | T | K | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | I | I | A | N | A | M | G | M | K | V | L | A | Y | D | I | L | D | . |
. |
. |
. |
. |
I | R | E | K | A | E | K | I | N | A | K | A | V | S | L | E | E | L | L | K |
Template Known Secondary structure |   |
T |
|  |  |  |  |  | S |
| S | . | . |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |
| . | . | . | . | . |
|  |  |  |  |  |  | T | T |
|  |  |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
| . | . |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|  |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | . | |
|
. | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|