Job Description P00968 Confidence 100.00% Date Thu Jan 5 10:57:25 GMT 2012 Rank 11 Aligned Residues 376 % Identity 24% Template c2dzdB_ PDB info PDB header:ligase Chain: B: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of the biotin carboxylase domain of2 pyruvate carboxylase Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.										.	70	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.
Query Sequence		T	D	I	K	S	I	L	I	L	G	A	G	P	I	V	I	G	Q	A	C	E	F	D	Y	S	G	A	Q	A	C	K	A	L	R	E	E	G	Y	R	V	I	L	V	N	S	N	P	A	T	I	M	T	D	P	E	M	A	D	A	T	Y	I	E	P	.	.	.	.	.	.	.	.	.	I	H	W	E	V	V	R
Query Conservation																																																																		.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	I	R	K	V	L	V	A	N	R	G	E	I	A	I	.	.	.	.	.	.	.	.	.	.	.	R	V	F	R	A	C	T	E	L	G	I	R	T	V	A	I	Y	S	K	E	D	V	G	S	Y	H	R	Y	K	A	D	E	A	Y	L	V	G	E	G	K	K	P	I	E	A	Y	L	D	I	E	G	I	I
Template Known Secondary structure					S													.	.	.	.	.	.	.	.	.	.	.									T	T									G	G	G	G	G		G	G	G	G	G	S	S						S	T	T	S						T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.												20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		K	I	I	E	K	E	R	P	D	A	V	L	P	T	M	G	G	Q	T	A	L	N	C	A	L	E	L	E	R	Q	G	V	L	E	E	F	G	V	T	M	I	G	A	T	A	D	A	I	D	K	A	E	D	R	R	R	F	D	V	A	M	K	K	I	G	L	E	T	A	R	S	G	.	.	I	A	H	T	M	E
Query Conservation																																																																										.	.
Alig confidence																		.	.	.												.	.																																									.	.
Template Conservation																		.	.	.												.	.
Template Sequence		E	I	A	K	A	H	D	V	D	A	I	H	P	G	Y	G	.	.	.	F	L	S	E	N	I	Q	F	A	K	R	.	.	C	R	E	E	G	I	I	F	I	G	P	N	E	N	H	L	D	M	F	G	D	K	V	K	A	R	H	A	A	V	N	A	G	I	P	V	I	P	G	S	D	G	P	V	D	G	L	E
Template Known Secondary structure							T	T								S	S	.	.	.	S	S	T	T								.	.				T	T				S	S										T	S										T	T	T			B			B		S	S			S	S
Template Predicted Secondary structure																		.	.	.												.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	A	V	A	A	D	V	G	F	P	C	I	I	R	P	S	F	T	M	G	G	S	G	G	G	I	A	Y	N	R	E	E	F	E	E	I	C	A	R	G	L	D	L	S	P	T	K	E	L	L	I	D	E	S	L	I	G	W	K	E	Y	E	M	E	V	V	R	D	K	N	D	N	C	I	I	V	C	S
Query Conservation
Alig confidence																																																.	.																																.
Template Conservation																																																.	.																																.
Template Sequence		D	V	V	A	F	A	E	A	H	G	Y	P	I	I	I	K	A	A	L	G	G	G	G	R	G	M	R	I	V	R	S	K	S	E	V	K	E	A	F	E	R	A	K	S	E	A	.	.	K	E	V	Y	V	E	K	L	I	E	N	P	K	H	I	E	V	Q	I	L	G	D	Y	E	G	N	I	V	H	L	Y	.
Template Known Secondary structure												S							T	T	T		S	S	T	T						S																.	.											S												T	T	S							.
Template Predicted Secondary structure																																																.	.																																.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	N	F	D	A	M	G	I	H	T	G	D	S	I	T	V	A	P	A	Q	T	L	T	D	K	E	Y	Q	I	M	R	N	A	S	M	A	V	L	R	E	I	G	V	E	T	G	G	S	N	V	Q	F	A	V	N	P	K	N	G	R	L	I	V	I	E	M	N	P	R	V	S	R	S	S	A	L	A	S	K
Query Conservation
Alig confidence		.																																													.											.	.
Template Conservation		.																																													.											.	.
Template Sequence		.	E	R	D	C	S	V	Q	R	R	H	Q	K	V	V	E	V	A	P	S	V	S	L	S	D	E	L	R	Q	R	I	C	E	A	A	V	Q	L	M	R	S	V	G	Y	V	.	N	A	G	T	V	E	F	L	V	S	.	.	G	D	E	F	Y	F	I	E	V	N	P	R	I	Q	V	E	H	T	I	T	E	M
Template Known Secondary structure		.									T	T								S		T	T																					T			.											.	.	T	T										S			T	T
Template Predicted Secondary structure		.																																													.											.	.
Template SS confidence
			231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.														.	.	360	.	.	.	.	.	.										.	.	.	370	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Query Sequence		A	T	G	F	P	I	A	K	V	A	A	K	L	A	V	G	Y	T	L	D	E	L	M	N	D	I	T	G	G	R	T	P	A	S	F	E	P	S	I	D	Y	V	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	P	R	F	N	F	E	K	.	.	.	.	.	.	.	.	.	F	A	G	A	N
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	G	I	D	I	V	Q	S	Q	I	L	I	A	D	G	C	S	L	H	S	H	E	V	G	I	P	K	Q	E	D	I	R	I	N	G	Y	A	I	Q	S	R	V	T	T	E	D	P	L	N	N	F	M	P	D	T	G	K	I	M	A	Y	R	S	G	G	G	F	G	V	R	L	D	A	G	N	G	F	Q	G
Template Known Secondary structure				T												T	T			T	T	S	T	T	T					T	T	T					S									S			T	T	T	T	T																T	T						S	S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		372	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		D	R	L	T	T	Q	M	K	S	.	V	G	E	V	M	A	I	G	R	T	Q	Q	E	S	L	Q	K	A	L	R	G	L	E
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		A	V	I	T	P	Y	Y	D	S	L	L	V	K	L	S	T	W	A	L	T	F	E	Q	A	A	R	K	M	L	R	N	L	R
Template Known Secondary structure						S	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.