|   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | E | E | G | Y | R | V | I | L | V | N | S | N | P | A | T | I | M | T | D | P | E | M | A | D | A | T | Y | I | E | P | I | H | W | E | V | V | R | K | I | I | E | K | E | R | P | D | A | V | L | P | T | M | G | G | Q | T | A | L | N | C | A | L | E | L | E | R | Q | G | V | L | E | E | F | G | V | T | M | I |
Query Conservation |   |
|
|
|   |
|
|   |
|
|
|
|   |   |
|
|   |
|
|   |
|   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|   |
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
Q | F | E | L | N | N | I | I | F | D | V | T | L | S | T | E | L | P | D | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | P | N | A | I | I | T | K | R | T | H | P | V | G | K | . |
. |
M | A | D | E | M | R | K | Y | . |
. |
E | K | D | H | P | K | V | L | F |
Template Known Secondary structure |   |
 |  |  |  | T | T |  |  |  |  |  |  |  |  | S | S |
|
| S | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| S |  |  |  |  |
|
| S |
| S | S | S |  | . | . |  |  |  |  |  |  |  |  | . | . |  |  |  |
| T | T | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |  | . | . |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
. | . | . | . | . | 70 | . | . | |
|
. | . | . | . | . | . | . | 80 | . |
  |
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | |
|
|
. | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | T | A | D | A | I | D | K | A | E | D | R | R | R | F | D | V | A | M | K | K | I | G | L | E | T | A | R | S | G | I | A | H | T | M | E | E | A | L | A | V | A | A | D | . |
. |
V | G | F | P | C | I | I | R | P | S | F | T | M | G | G | S | G | . |
. |
. |
G | G | I | A | Y | N | R | E | E | F | E | E | I |
Query Conservation |   |
|   |   |   |   |
|
|   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|   |
|   |   |
|   |
|   |
|
|
|   |   |   |
|   |   | . | . |
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|   |
| . | . | . |
|   |
|
|   |
|   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |   |
|
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |
Template Sequence |   |
L | E | S | S | A | I | H | D | M | M | S | S | R | E | E | I | N | A | L | L | I | K | N | N | I | P | I | P | N | S | F | S | V | K | S | K | E | E | V | I | Q | L | L | Q | S | K | Q | L | I | L | P | F | I | V | K | P | E | N | A | Q | G | T | F | N | A | H | Q | M | K | I | V | L | E | Q | E | G | I | D | D | I |
Template Known Secondary structure |   |
 | T |
|  |  |  |  |  |  |  | T | B |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S |
|  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T | S | S |
| S | S |  |  |  |  |  | S | B |
| S | S | S | S | G | G | G |  |  |  |  |  |
| S | G | G | G | G | T | T |
|
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
192 | . | . | . | . | . | . | . | 200 | . | |
|
. | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
Query Sequence |   |
C | A | R | G | L | D | L | S | P | T | . |
. |
K | E | L | L | I | D | E | S | L | I | G | W | K | E | Y | E | M | E | V | V | R | D | K | N | D | N | C | I | I | V | C | S | I | E | N | F | D | A | M | G | I | H | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | D | S |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   | . | . |   |   |
|
|
|
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |
|   |
|   |   |   |
|   |   |
|
|   |
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|
|   |
| . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
H | F | P | C | L | C | Q | H | Y | I | N | H | N | N | K | I | V | K | V | F | C | I | G | . |
N | T | L | K | W | Q | T | R | T | S | L | P | N | V | H | R | C | G | I | K | S | V | D | F | N | N | Q | H | L | E | D | I | L | S | W | P | E | G | V | I | D | K | Q | D | I | I | E | N | S | A | N | R | F | G | S | K |
Template Known Secondary structure |   |
| S | S |  |  |  |  |  |
|
|
|
| T | T |
|  |  |  |  |  |  |  | T | . | T |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| S | S |
|
|  |  |  |  |  | T | T | B | G | G | G | G | G | G | S |
| T | T | S | S |
|  |  |  |  |  |  |  |  | T | T | T | T |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
  |
  |   |
248 | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | |
|
. | . | . | . | . | . | . | . | 310 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | T | V | A | P | A | Q | T | L | T | D | K | E | Y | Q | I | M | R | N | A | S | M | A | V | L | R | E | I | G | V | E | T | G | G | S | N | V | Q | F | A | V | N | P | K | N | G | R | L | I | V | I | E | M | N | . |
. |
P | R | V | S | R | S | S | A | L | A | S | K | A |
Query Conservation |   |
|   |
|
|
|
|   |
|
|   |
|   |   |   |   |   |
|
|   |   |
|   |
|
|   |
|   |
|
|
|   |   |
|   |   |
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|
| . | . |   |
|   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
I | L | E | D | P | I | L | . |
L | N | L | T | S | E | A | E | M | R | D | L | A | Y | K | V | R | C | A | L | G | V | . |
. |
Q | L | C | G | I | D | F | I | K | E | N | E | Q | G | N | P | L | V | V | D | V | N | V | F | P | S | Y | G | G | K | V | D | F | D | W | F | V |
Template Known Secondary structure |   |
B |
| S |
| T | T | T | . | T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| . | . | S |  |  |  |  |  |  |  |
| G | G | G |
| S | S |
|  |  |  |  |  |  |  | S |
|
| T | T | S | S | B |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
241 | . | . | . | . | . | . | |
. | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | |
|
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
  |