Job Description P00968 Confidence 100.00% Date Thu Jan 5 10:57:25 GMT 2012 Rank 24 Aligned Residues 343 % Identity 17% Template c1vkzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: crystal structure of phosphoribosylamine--glycine ligase (tm1250) from2 thermotoga maritima at 2.30 a resolution Resolution 2.30 Å

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		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	M	V	L	G	G	G	P	N	R	I	G	Q	G	I	E	F	D	Y	C	C	V	H	A	S	L	A	L	R	E	D	G	Y	E	T	I	M	V	N	C	N	P	E	T	V	S	T	D	Y	D	T	S	D	R	L	Y	F	E	P	V	T	L	E	D	V	L	E	I	V	R	I	E	K	P	K	G	V	I	V
Query Conservation
Alig confidence										.	.	.	.	.	.								.	.	.	.	.																		.	.	.	.	.	.	.																						.	.
Template Conservation										.	.	.	.	.	.								.	.	.	.	.																		.	.	.	.	.	.	.																						.	.
Template Sequence		R	V	H	I	L	G	S	G	.	.	.	.	.	.	G	R	E	H	A	I	G	.	.	.	.	.	W	A	F	A	K	Q	G	Y	E	V	H	F	Y	P	G	N	A	.	.	.	.	.	.	.	G	T	K	R	D	G	T	N	H	P	Y	E	G	E	K	T	L	K	A	I	P	.	.	E	E	D	I	V	I	P
Template Known Secondary structure									S	.	.	.	.	.	.								.	.	.	.	.						T	T										T	.	.	.	.	.	.	.	T	G	G	G	T	S							T						T	S		.	.	S	S
Template Predicted Secondary structure										.	.	.	.	.	.								.	.	.	.	.																		.	.	.	.	.	.	.																						.	.
Template SS confidence
		5	.	.	.	.	10	.	.							.	.	.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.								.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	G	G	Q	T	P	L	K	L	A	R	A	L	E	A	A	G	V	P	V	I	G	T	S	P	D	A	I	D	R	A	E	D	R	E	R	F	Q	H	A	V	E	R	L	K	L	K	Q	P	A	N	A	T	V	T	A	I	E	M	A	V	E	K	A	K	E	I	G	Y	P	L	V	V	R	P	S	Y	V	L
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.
Template Sequence		G	S	E	.	.	.	.	.	.	.	.	.	E	F	L	V	E	R	S	N	V	F	G	P	V	K	E	V	A	R	L	E	G	S	K	V	Y	A	K	R	F	X	K	K	Y	G	I	R	T	A	R	F	E	V	A	E	T	P	E	E	L	R	E	K	I	K	K	F	S	P	P	Y	V	I	K	A	D	G	L	A
Template Known Secondary structure		S	S	G	.	.	.	.	.	.	.	.	.	G	G	T				T	T	B	S	S																						T	T										S	S									T	T	S		S	S						S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.										.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.					.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.						.	.	.	.	.	790	.
Predicted Secondary structure																									.	.	.	.																																										.	.	.	.	.
Query SS confidence																									.	.	.	.																																										.	.	.	.	.
Query Sequence		G	G	R	A	M	E	I	V	Y	D	E	A	D	L	R	R	Y	F	Q	T	A	V	S	.	.	.	.	V	S	N	D	A	P	V	L	L	D	H	F	L	D	D	A	V	E	V	D	V	D	A	I	C	D	G	E	M	V	L	I	G	G	I	M	E	H	I	E	Q	.	.	.	.	.	A	G	V	H	S	G	D
Query Conservation																									.	.	.	.																																										.	.	.	.	.
Alig confidence																									.	.	.	.															.																											.	.	.	.	.
Template Conservation																																											.
Template Sequence		R	G	K	G	V	L	I	L	D	S	K	E	E	T	I	E	K	G	S	K	L	I	I	G	E	L	I	K	G	V	K	G	P	V	V	I	D	E	F	L	A	.	G	N	E	L	S	A	X	A	V	V	N	G	R	N	F	V	I	L	P	F	V	R	D	Y	K	R	L	X	D	G	D	R	G	P	N	T	G	G
Template Known Secondary structure		S	S							S	S														T	S	S	S	T	T			S										.	S											T	T																T	T	T						S
Template Predicted Secondary structure																																											.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		792	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820						.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.		850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.																														.
Query SS confidence																															.	.	.	.	.																														.
Query Sequence		S	A	C	S	L	P	A	Y	T	L	S	Q	E	I	Q	D	V	M	R	Q	Q	V	Q	K	L	A	F	E	L	.	.	.	.	.	Q	V	R	G	L	M	N	V	Q	F	A	V	K	N	N	E	V	Y	L	I	E	V	N	P	R	A	A	R	T	.	V	P	F	V	S	K	A	T	G	V	P	L	A	K	V	A
Query Conservation																															.	.	.	.	.																														.
Alig confidence										.																					.	.	.	.	.																														.
Template Conservation										.
Template Sequence		X	G	S	W	G	P	V	E	.	I	P	S	D	T	I	K	K	I	E	E	L	F	D	K	T	L	W	G	V	E	K	E	G	Y	A	Y	R	G	F	L	Y	L	G	L	X	L	H	D	G	D	P	Y	I	L	E	Y	N	V	R	L	G	D	P	E	T	E	V	I	V	T	L	N	P	E	G	F	V	N	A	V
Template Known Secondary structure		S								.																							T	T															T	T									S	S			T	T
Template Predicted Secondary structure										.
Template SS confidence
		220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		866	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.														.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.				.	.	.	920	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query Sequence		A	R	V	M	A	G	K	S	L	A	E	Q	G	V	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	P	P	Y	Y	S	V	K	E	V	V	L	P	F	N	K	F	P	G	V	D	P	L	L	G	P	E	M	R	S	T	G	E	.	.	.	V	M	G	V	G	R	T	F	A	E	A	F	A
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Conservation
Template Sequence		L	E	G	Y	R	G	G	K	X	E	P	V	E	P	R	G	F	A	V	D	V	V	L	A	A	R	G	Y	P	D	A	P	E	K	G	K	E	I	T	L	P	E	E	G	L	I	F	F	A	G	V	A	E	K	D	G	K	L	V	T	N	G	G	R	V	L	H	C	X	G	T	G	E	T	K	E	E	A	R	R
Template Known Secondary structure							T	S									S										T	T	T	T	T	S						B		B			S	S						S	S					T	T						S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		930	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	Q	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	Y	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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