Job Description P00968 Confidence 100.00% Date Thu Jan 5 10:57:25 GMT 2012 Rank 10 Aligned Residues 397 % Identity 24% Template c1ulzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain; PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase Resolution 2.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.								.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.
Query Sequence		I	K	S	I	L	I	L	G	A	G	P	I	V	I	G	Q	A	C	E	F	D	Y	S	G	A	Q	A	C	K	A	L	R	E	E	G	Y	R	V	I	L	V	N	S	N	P	A	T	I	M	T	D	P	E	M	A	D	A	T	Y	I	E	P	.	.	.	.	.	.	.	I	H	W	E	V	V	R	K	I	I	E
Query Conservation																																																																.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	K	V	L	V	A	N	R	G	E	I	A	V	.	.	.	.	.	.	.	.	.	.	.	R	I	I	R	A	C	K	E	L	G	I	P	T	V	A	I	Y	N	E	V	E	S	T	A	R	H	V	K	L	A	D	E	A	Y	M	I	G	T	D	P	L	D	T	Y	L	N	K	Q	R	I	I	N	L	A	L
Template Known Secondary structure			S	S												.	.	.	.	.	.	.	.	.	.	.										T									G	G	G	T	T							S	S							S	S	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.												.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		K	E	R	P	D	A	V	L	P	T	M	G	G	Q	T	A	L	N	C	A	L	E	L	E	R	Q	G	V	L	E	E	F	G	V	T	M	I	G	A	T	A	D	A	I	D	K	A	E	D	R	R	R	F	D	V	A	M	K	K	I	G	L	E	T	A	R	S	G	.	.	I	A	H	T	M	E	E	A	L	A
Query Conservation																																																																						.	.
Alig confidence														.	.	.												.	.																																									.	.
Template Conservation														.	.	.												.	.
Template Sequence		E	V	G	A	D	A	I	H	P	G	Y	G	.	.	.	F	L	A	E	N	A	E	F	A	K	M	.	.	C	E	E	A	G	I	T	F	I	G	P	H	W	K	V	I	E	L	M	G	D	K	A	R	S	K	E	V	M	K	K	A	G	V	P	V	V	P	G	S	D	G	V	L	K	S	L	E	E	A	K	A
Template Known Secondary structure			T	T								S	S	.	.	.	T	T	T	T								.	.				T	T				S	S	S										S											T	T			B			B		S	S	S
Template Predicted Secondary structure														.	.	.												.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		V	A	A	D	V	G	F	P	C	I	I	R	P	S	F	T	M	G	G	S	G	G	G	I	A	Y	N	R	E	E	F	E	E	I	C	A	R	.	.	.	.	G	L	D	L	S	P	T	K	E	L	L	I	D	E	S	L	I	G	W	K	E	Y	E	M	E	V	V	R	D	K	N	D	N	C	I	I	V	C	S
Query Conservation																																							.	.	.	.
Alig confidence																																							.	.	.	.																																							.
Template Conservation																																																																																	.
Template Sequence		L	A	R	E	I	G	Y	P	V	L	L	K	A	T	A	G	G	G	G	R	G	I	R	I	C	R	N	E	E	E	L	V	K	N	Y	E	Q	A	S	R	E	A	E	K	A	F	G	R	G	D	L	L	L	E	K	F	I	E	N	P	K	H	I	E	Y	Q	V	L	G	D	K	H	G	N	V	I	H	L	G	.
Template Known Secondary structure								S	S							S	S	S	S			S					S	S																		T	T	S												S												T	T	S							.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	N	F	D	A	M	G	I	H	T	G	D	S	I	T	V	A	P	A	Q	T	L	T	D	K	E	Y	Q	I	M	R	N	A	S	M	A	V	L	R	E	I	G	V	E	T	G	G	S	N	V	Q	F	A	V	N	P	K	N	G	R	L	I	V	I	E	M	N	P	R	V	S	R	S	S	A	L	A	S	K
Query Conservation
Alig confidence		.																																													.												.
Template Conservation		.																																													.												.
Template Sequence		.	E	R	D	C	S	I	Q	R	R	N	Q	K	L	V	E	I	A	P	S	L	I	L	T	P	E	K	R	E	Y	Y	G	N	I	V	T	K	A	A	K	E	I	G	Y	Y	.	N	A	G	T	M	E	F	I	A	D	Q	.	E	G	N	L	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	V	S	E	M
Template Known Secondary structure		.									T	T								S		S	S																				T	T			.											T	.	T											S			T	T
Template Predicted Secondary structure		.																																													.												.
Template SS confidence
			225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.										.	.	.	.	.	360	.	.	.							.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Query Sequence		A	T	G	F	P	I	A	K	V	A	A	K	L	A	V	G	Y	T	L	D	E	L	M	N	D	I	T	G	G	R	T	P	A	S	F	E	P	S	I	D	Y	.	.	.	.	.	.	.	.	.	V	V	T	K	I	P	R	F	N	.	.	.	.	.	.	F	E	K	F	A	G	A	N	D	R	L	T	T	Q	M
Query Conservation																																											.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	G	I	D	I	V	K	W	Q	I	K	I	A	A	G	E	P	L	T	I	K	Q	E	D	V	K	F	N	G	Y	A	I	E	C	R	I	N	A	E	D	P	K	K	N	F	A	P	S	T	R	V	I	E	R	Y	Y	V	P	G	G	F	G	I	R	V	E	H	A	A	A	R	G	F	E	V	T	P	Y	Y
Template Known Secondary structure																T	T							G	G	G					S									S			G	G	G	T	T					S	B			S						S	T	T									T	T		B			S	S	S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		379	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure				.																											.
Query SS confidence				.																											.
Query Sequence		K	S	.	V	G	E	V	M	A	I	G	R	T	Q	Q	E	S	L	Q	K	A	L	R	G	L	E	V	G	A	.	T	G	F	D	P	K	V	S	L	D	D	P	E	A	L	T	K	I	R	R	E	L	K	D	A
Query Conservation				.																											.
Alig confidence				.																											.										.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.
Template Sequence		D	S	M	I	A	K	L	I	T	W	A	P	T	W	D	E	A	V	E	R	M	R	A	A	L	E	T	Y	E	I	T	G	V	K	T	T	I	P	L	.	.	.	.	.	.	.	.	L	I	N	I	M	K	E	K
Template Known Secondary structure													S	S														T					S	S			S				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420									.	.	.	.	.	.	.	.