Job Description P00968 Confidence 100.00% Date Thu Jan 5 10:57:25 GMT 2012 Rank 28 Aligned Residues 358 % Identity 16% Template c1gsoA_ PDB info PDB header:ligase Chain: A: PDB Molecule:protein (glycinamide ribonucleotide synthetase); PDBTitle: glycinamide ribonucleotide synthetase (gar-syn) from e.2 coli. Resolution 1.60 Å

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		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	M	V	L	G	G	G	P	N	R	I	G	Q	G	I	E	F	D	Y	C	C	V	H	A	S	L	A	L	R	E	D	G	Y	E	T	I	M	V	N	C	N	P	E	T	V	S	T	D	Y	D	T	S	D	R	L	Y	F	E	P	V	T	L	E	D	V	L	E	I	V	R	I	E	K	P	K	G	V	I	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	L	V	I	G	N	G	G	R	E	.	.	.	.	.	.	.	.	.	.	.	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	G	T	A	L	E	P	A	L	Q	N	V	A	I	G	V	T	D	I	P	A	L	L	D	F	A	Q	N	E	K	I	D	L	T	I	V
Template Known Secondary structure									S				.	.	.	.	.	.	.	.	.	.	.								T	T		T	T																S	T	T								T	T												T	T		S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.												.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	G	G	Q	T	P	L	K	L	A	R	A	L	E	A	A	G	V	P	V	I	G	T	S	P	D	A	I	D	R	A	E	D	R	E	R	F	Q	H	A	V	E	R	L	K	L	K	Q	P	A	N	A	T	V	T	A	I	E	M	A	V	E	K	A	K	E	I	G	Y	P	L	V	V	R	P	S	Y	V	L
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		G	P	E	A	P	L	V	K	G	V	V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T	E	V	E	P	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K	A	.	.	.	.
Template Known Secondary structure			S						T	T								T	T					S			T	T	T	T																T	T			B							S	S	S	S											S	S						.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		721	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.					.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.						.	.	.	.	790	.
Predicted Secondary structure																												.	.	.	.																																								.	.	.	.	.
Query SS confidence																												.	.	.	.																																								.	.	.	.	.
Query Sequence		G	G	R	A	M	E	I	V	Y	D	E	A	D	L	R	R	Y	F	Q	T	A	V	S	V	S	N	.	.	.	.	D	A	P	V	L	L	D	H	F	L	D	D	A	V	E	V	D	V	D	A	I	C	D	G	E	M	V	L	I	G	G	I	M	E	H	I	E	Q	A	.	.	.	.	.	G	V	H	S	G	D
Query Conservation																												.	.	.	.																																								.	.	.	.	.
Alig confidence		.	.																									.	.	.	.												.																												.	.	.	.	.
Template Conservation		.	.																																								.
Template Sequence		.	.	K	G	V	I	V	A	M	T	L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	.	G	E	E	A	S	F	I	V	M	V	D	G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	D	K	D	T	G	P	N	T	G	G
Template Known Secondary structure		.	.							S	S									T	T	T	T		S			T	T		T	T											.												S	S																T	T	T
Template Predicted Secondary structure		.	.																																								.
Template SS confidence
				153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		792	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.							820	.	.	.	.	.	.	.	.	.	830	.	.	.		.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.		.	.	.	.	860	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.															.																							.
Query SS confidence																														.	.	.	.	.	.															.																							.
Query Sequence		S	A	C	S	L	P	A	Y	T	L	S	Q	E	I	Q	D	V	M	R	Q	Q	V	Q	K	L	A	F	E	.	.	.	.	.	.	L	Q	V	R	G	L	M	N	V	Q	F	A	V	K	.	N	N	E	V	Y	L	I	E	V	N	P	R	A	A	R	T	V	P	F	V	S	K	.	A	T	G	V	P	L	A	K
Query Conservation																														.	.	.	.	.	.															.																							.
Alig confidence																														.	.	.	.	.	.															.																							.
Template Conservation
Template Sequence		M	G	A	Y	S	P	A	P	V	V	T	D	D	V	H	Q	R	T	M	E	R	I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	G	N	P	K	V	I	E	F	N	C	R	F	G	D	L	E	T	Q	P	I	M	L	R	M	K	S	D	L	V	E
Template Known Secondary structure							S		T	T													T											T	T															T	T										S	S			T	T	T								B		S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		864	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.														.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.						.	.	.	.	910	.	.	.	.				.	.	.	.	.	920	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.										.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.										.	.	.
Query Sequence		V	A	A	R	V	M	A	G	K	S	L	A	E	Q	G	V	T	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	P	P	Y	Y	S	V	K	E	V	V	L	P	F	N	K	F	P	G	V	D	P	.	.	.	.	.	L	L	G	P	E	M	R	S	T	.	.	.	G	E	V	M	G	V	G	R
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.										.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		L	C	L	A	A	C	E	S	K	L	D	E	K	T	S	E	W	D	E	R	A	S	L	G	V	V	M	A	A	G	G	Y	P	G	D	Y	R	T	G	D	V	I	H	G	L	P	L	E	E	V	A	G	G	K	V	F	H	A	G	T	K	L	A	Q	V	V	T	N	G	G	R	V	L	C	V	T	A	L	G	H
Template Known Secondary structure								T	T		G	G	G					B		S	S										T	T	T	T	S							B		B				S	S			T	T						S	S										S	S										S
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		923	.	.	.	.	.	.	930	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	A	E	A	F	A	K	A	Q	L	G	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	A	E	A	Q	K	R	A	Y	A	L	M	T
Template Known Secondary structure		S												T	T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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