Return to main results Retrieve Phyre Job Id

Job DescriptionP76176
Confidence99.92%DateThu Jan 5 12:20:09 GMT 2012
Rank101Aligned Residues210
% Identity19%Templated2hlca_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.. .......70.........80.........90.........100.........110.....
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLE. . TASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHD
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Template Sequence  IINGYE. . . . AYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD. . . . . . . . . . AVSVVVYLGSAVQYEGE
Template Known Secondary structure 
BT
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TTTSTTTTS
TT
TT..........S
SBTT

S
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   16...20. ........30.........40.........50.........60.... .....70.........80.
 
   116...120.........130.........140.........150.... .....160.........170.........180.........190...
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Query Sequence  IEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNP. . PSGITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHLD
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Template Sequence  AVVNSERIISHSMF. . . . . . . . NPDTYLNDVALIKIPHVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDTVIL
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S
TT
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B


GGGGG


TT
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B
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   81........90.... .....100.........110.........120.........130.........140.........150..
 
   194.....200.........210...... ...220.........230.........240.........250.........260...
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Query Sequence  TLYSHQNCEVTGWAQTSVMSHQC. . . . . . . . . . DTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVTGF
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Template Sequence  QYTYNLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPFVLSDKNLLIGVVSFVSGAGCESGKPVGFSRVTSY
Template Known Secondary structure 
TTS
TTSS
TT

TTS
B

TT
TT
GGGT

TT
TTS


GGGG
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   156...160.........170.........180.........190.........200.........210.........220.........230.....
 
   264.....
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Query Sequence  RDKLDQ
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Template Sequence  MDWIQQ
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   235....240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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