Return to main results Retrieve Phyre Job Id

Job DescriptionP76176
Confidence99.97%DateThu Jan 5 12:20:09 GMT 2012
Rank26Aligned Residues218
% Identity19%Templated1z8ga1
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIE
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Template Sequence  IVGGRD. . . . TSLGRWPWQVS. . LRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAG. . . . . . . AVAQASPHG
Template Known Secondary structure 
BS
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TTSSTT..TTSSSS
GGG

GGG

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SBTT
TTS
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   163..... .170......... 180.........190.........200.........210.........220 .........
 
   118.120.........130.........140.........150...... ...160... ......170.........180.........190...
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Query Sequence  GRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPS. . . GITPLPL. FEGDKAALTAALKAAGRKVTQAGYPEDHLD
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Template Sequence  LQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVL
Template Known Secondary structure 
TT
GGGT
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TT
SSBSSTTS
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SB
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   230.........240.........250.........260.........270.........280.........290.........300.........
 
   194... ..200.........210.........220.........230.. .......240.........250.....
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Query Sequence  TLYS. . . . . . . . . . . . . . HQNCEVTGWAQTSVMSHQCDTLPGDSGSPLMLHTD. . . . DGWQLIGVQSSAPAAKDRWRADN
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Template Sequence  QEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKP. G
Template Known Secondary structure 
TSTTTTTT


TTS
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   310.........320.........330.........340.........350.........360.........370.........380....... .
 
   256...260.........
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Query Sequence  RAISVTGFRDKLDQ
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Template Sequence  VYTKVSDFREWIFQ
Template Known Secondary structure  GGGG
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   389390.........400..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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