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Job DescriptionP76176
Confidence99.93%DateThu Jan 5 12:20:09 GMT 2012
Rank92Aligned Residues203
% Identity15%Templated1v2lt_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIE
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Template Sequence  IVGGYT. . . . CGANTVPYQVSLN. . . SGYHFCGGSLINSQWVVSAAHCYKSGIQ. . . . . . . . . . VRLGEDNINVVEGNEQ
Template Known Secondary structure 
BS
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TTSSTT...SSSTT
GGG

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SSTTS

S

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   16...20. ........30.... .....40.........50.........60.. .......70........
 
   118.120.........130.........140.........150...... ...160.........170.........180.........190....
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Query Sequence  GRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPS. . . GITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHLDT
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Template Sequence  FISASKSIVHPSYNSETYNN. . . . . . . DIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLK
Template Known Secondary structure 
TT
BTTTTBT.......

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SSS


B

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   82.......90.........100. ........110.........120.........130.........140.........150....
 
   195....200..... ....210.........220.........230.........240.........250.........260..
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Query Sequence  LYSHQNCEVTG. . . . . . . . . . . . WAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVTG
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Template Sequence  CLKAPILSDSSCKSASSFIITSNMFCAGYLEGGKDACQGDSGGPVVC. . . . SGKLQGIVSWGEGCAQKNKP. GVYTKVCN
Template Known Secondary structure  B

TT
SS


TTS
TT
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TT
TT
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SSSSBTTB
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   157..160.........170.........180.........190.........200... ......210.........220... ......230.
 
   263......
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Query Sequence  FRDKLDQ
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Template Sequence  YVSWIKQ
Template Known Secondary structure  S
Template Predicted Secondary structure 
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   234.....240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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