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Job DescriptionP76176
Confidence100.00%DateThu Jan 5 12:20:09 GMT 2012
Rank19Aligned Residues214
% Identity21%Templated1rjxb_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
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Query Sequence  RSANDEVSTLFFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKG
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Template Sequence  QVEPKKCPGAVVGGCV. . . . AYPHSWPWQVSL. RTRFGMHFCGGTLISPEWVLTAAHCLEKSPR. . . . . PSSYKVILGAH
Template Known Secondary structure  SS





TTSTT
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TTSSTT.TT

TTGGGGTT
S
.....GGGS

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   552.......560....... ..570......... 580.........590.........600.........610 .........620.
 
   108.110.........120.........130.........140.........150....... ..160.........170... ......180...
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Query Sequence  LWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSG. . . ITPLPLFEGDKAALTA. ALKAAGRKVT
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Template Sequence  QEVNLEPHVQEIEVSRLFL. . . . . . . . . . . . . EPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGEF
Template Known Secondary structure  BSSS

TT
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SSS

SS




SS



B


TT



TT




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   622.......630.........640 .........650.........660.........670.........680........
 
   184.....190.........200..... ....210.........220.........230.........240.........250....
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Query Sequence  QAGYPEDHLDTLYSHQNCEVTG. . . . . . . . . WAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRAD
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Template Sequence  GAGLLMEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKP.
Template Known Secondary structure 

SB

TSTTTTTT
S
TTS
SSS


B

S
TT

SSS
TTS

BBTTB
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   693......700.........710.........720.........730.........740.........750.........760.........770.
 
   255....260.....
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Query Sequence  NRAISVTGFRD
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Template Sequence  GVYVRVSRFVT
Template Known Secondary structure  GGGG
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   772.......780..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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