Return to main results Retrieve Phyre Job Id

Job DescriptionP76176
Confidence100.00%DateThu Jan 5 12:20:09 GMT 2012
Rank10Aligned Residues214
% Identity19%Templated1p3ca_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Prokaryotic proteases
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  LFFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDI
Query Conservation   
 
 
 
  
      

 

  
       





    







                              
Alig confidence 






























.























....



















Template Conservation   
 
 
 
  
      
  

  
      .


 

    







      ....                    
Template Sequence  VVIGDDGRTKVANTRVAPYNSIAYITFGGSS. CTGTLIAPNKILTNGHCVYNTASR. . . . SYSAKGSVYPGMNDSTAVNG
Template Known Secondary structure 


SS



S
TTSTTGGG
SS
.TT
TTTT....



T
BTTB
TT
Template Predicted Secondary structure 

















.









....









Template SS confidence 















































































   1........10.........20.........30. ........40.........50..... ....60.........70.....
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  EGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHLDTLY
Query Conservation     
                        




 
  
      
 
               
 
    
          
Alig confidence 















.......






















































..
Template Conservation                  .......     
 
   
                         
 
               ..
Template Sequence  SANMTEFYVPSGYINT. . . . . . . GASQYDFAVIKTDTNIGNTVGYRSIRQVTNLTGTTIKISGYPGDKMRSTGKVSQW. .
Template Known Secondary structure 


.......

GGG

SS




B


S

TT


SS


..
Template Predicted Secondary structure 






.......


































..
Template SS confidence 















































































   76...80.........90. ........100.........110.........120.........130.........140......
 
   197..200.........210.........220.........230.........240.........250.........260 .........270...
Predicted Secondary structure 






























.

Query SS confidence 































































.












Query Sequence  SHQNCEVTGWAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISV. TGFRDKLDQLSQK
Query Conservation      
               


 






     
   



 
 
                .             
Alig confidence  ..





























...


















....





.












Template Conservation  ..                      
 




 ...     



 
 
      ....
            
  
   
Template Sequence  . . EMSGSVTREDTNLAYYTIDTFSGNSGSAML. . . DQNQQIVGVHNAGYSNGTI. . . . NGGPKATAAFVEFINYAKAQ
Template Known Secondary structure  ..


SS




TT
TT
...
TTS


GGGT....B

T
Template Predicted Secondary structure  ..















...












....



Template SS confidence 













































































   147..150.........160.........170...... ...180.........190..... ....200.........210.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions